Protein–RNA interactions for Protein: O88351

Ikbkb, Inhibitor of nuclear factor kappa-B kinase subunit beta, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkbO88351 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.04■□□□□ 0.48
IkbkbO88351 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
IkbkbO88351 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IkbkbO88351 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
IkbkbO88351 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
IkbkbO88351 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IkbkbO88351 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.03■□□□□ 0.48
IkbkbO88351 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
IkbkbO88351 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
IkbkbO88351 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
IkbkbO88351 Ank2-226ENSMUST00000189368 339 ntBASIC18.03■□□□□ 0.48
IkbkbO88351 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IkbkbO88351 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IkbkbO88351 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IkbkbO88351 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IkbkbO88351 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IkbkbO88351 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.03■□□□□ 0.48
IkbkbO88351 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IkbkbO88351 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IkbkbO88351 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
IkbkbO88351 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.03■□□□□ 0.48
IkbkbO88351 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
IkbkbO88351 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
IkbkbO88351 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
IkbkbO88351 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.02■□□□□ 0.48
IkbkbO88351 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
IkbkbO88351 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.02■□□□□ 0.48
IkbkbO88351 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
IkbkbO88351 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
IkbkbO88351 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.02■□□□□ 0.48
IkbkbO88351 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
IkbkbO88351 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
IkbkbO88351 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.02■□□□□ 0.47
IkbkbO88351 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
IkbkbO88351 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
IkbkbO88351 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.01■□□□□ 0.47
IkbkbO88351 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IkbkbO88351 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IkbkbO88351 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
IkbkbO88351 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IkbkbO88351 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
IkbkbO88351 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
IkbkbO88351 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
IkbkbO88351 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IkbkbO88351 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
IkbkbO88351 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
IkbkbO88351 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.01■□□□□ 0.47
IkbkbO88351 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IkbkbO88351 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
IkbkbO88351 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
IkbkbO88351 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
IkbkbO88351 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.01■□□□□ 0.47
IkbkbO88351 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
IkbkbO88351 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.01■□□□□ 0.47
IkbkbO88351 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
IkbkbO88351 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
IkbkbO88351 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IkbkbO88351 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IkbkbO88351 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IkbkbO88351 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IkbkbO88351 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IkbkbO88351 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
IkbkbO88351 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IkbkbO88351 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IkbkbO88351 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IkbkbO88351 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IkbkbO88351 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18■□□□□ 0.47
IkbkbO88351 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
IkbkbO88351 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
IkbkbO88351 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
IkbkbO88351 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IkbkbO88351 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18■□□□□ 0.47
IkbkbO88351 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
IkbkbO88351 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IkbkbO88351 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IkbkbO88351 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IkbkbO88351 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
IkbkbO88351 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
IkbkbO88351 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IkbkbO88351 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
IkbkbO88351 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
IkbkbO88351 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
IkbkbO88351 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
IkbkbO88351 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
IkbkbO88351 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
IkbkbO88351 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
IkbkbO88351 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
IkbkbO88351 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
IkbkbO88351 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
IkbkbO88351 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
IkbkbO88351 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
IkbkbO88351 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
IkbkbO88351 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.99■□□□□ 0.47
IkbkbO88351 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
IkbkbO88351 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
IkbkbO88351 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.98■□□□□ 0.47
IkbkbO88351 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
IkbkbO88351 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
IkbkbO88351 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
IkbkbO88351 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms