Protein–RNA interactions for Protein: O88245

Gm10139, Mszf85 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10139O88245 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm10139O88245 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm10139O88245 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Gm10139O88245 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm10139O88245 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm10139O88245 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Gm10139O88245 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Gm10139O88245 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Gm10139O88245 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Gm10139O88245 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC9.94□□□□□ -0.82
Gm10139O88245 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Gm10139O88245 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Gm10139O88245 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC9.94□□□□□ -0.82
Gm10139O88245 Gm2274-201ENSMUST00000184539 609 ntBASIC9.94□□□□□ -0.82
Gm10139O88245 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Gm10139O88245 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm10139O88245 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm10139O88245 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm10139O88245 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Gm10139O88245 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm10139O88245 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm10139O88245 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm10139O88245 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Gm10139O88245 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Gm10139O88245 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
Gm10139O88245 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Gm10139O88245 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Gm10139O88245 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Gm10139O88245 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Gm10139O88245 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Gm10139O88245 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Gm10139O88245 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC9.93□□□□□ -0.82
Gm10139O88245 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
Gm10139O88245 Gm44616-201ENSMUST00000206417 1732 ntBASIC9.93□□□□□ -0.82
Gm10139O88245 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC9.93□□□□□ -0.82
Gm10139O88245 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Gm10139O88245 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC9.93□□□□□ -0.82
Gm10139O88245 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Gm10139O88245 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Gm10139O88245 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Gm10139O88245 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Gm10139O88245 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Gm10139O88245 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Gm10139O88245 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Gm10139O88245 Gm11336-201ENSMUST00000118168 334 ntBASIC9.93□□□□□ -0.82
Gm10139O88245 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC9.93□□□□□ -0.82
Gm10139O88245 Gm22240-201ENSMUST00000175225 82 ntBASIC9.93□□□□□ -0.82
Gm10139O88245 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Gm10139O88245 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Gm10139O88245 Gm7213-201ENSMUST00000215977 950 ntBASIC9.93□□□□□ -0.82
Gm10139O88245 Gm5417-201ENSMUST00000079706 384 ntBASIC9.93□□□□□ -0.82
Gm10139O88245 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Gm10139O88245 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Gm10139O88245 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Gm10139O88245 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Gm10139O88245 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Gm10139O88245 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Gm10139O88245 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC9.93□□□□□ -0.82
Gm10139O88245 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Gm10139O88245 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Gm10139O88245 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Gm10139O88245 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Gm10139O88245 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Gm10139O88245 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Gm10139O88245 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Gm10139O88245 AC153526.5-201ENSMUST00000218661 2147 ntBASIC9.92□□□□□ -0.82
Gm10139O88245 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Gm10139O88245 Gm16011-201ENSMUST00000121567 2662 ntBASIC9.92□□□□□ -0.82
Gm10139O88245 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC9.92□□□□□ -0.82
Gm10139O88245 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Gm10139O88245 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Gm10139O88245 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Gm10139O88245 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Gm10139O88245 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Gm10139O88245 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Gm10139O88245 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC9.92□□□□□ -0.82
Gm10139O88245 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Gm10139O88245 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Gm10139O88245 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Gm10139O88245 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Gm10139O88245 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Gm10139O88245 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Gm10139O88245 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Gm10139O88245 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC9.92□□□□□ -0.82
Gm10139O88245 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Gm10139O88245 Gm30025-201ENSMUST00000218555 728 ntBASIC9.92□□□□□ -0.82
Gm10139O88245 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Gm10139O88245 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Gm10139O88245 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Gm10139O88245 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Gm10139O88245 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Gm10139O88245 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Gm10139O88245 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Gm10139O88245 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Gm10139O88245 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Gm10139O88245 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Gm10139O88245 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Gm10139O88245 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Gm10139O88245 Gm15442-201ENSMUST00000117905 1527 ntBASIC9.92□□□□□ -0.82
Gm10139O88245 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms