Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.22■□□□□ 0.35
Pja1O55176 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Pja1O55176 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.22■□□□□ 0.35
Pja1O55176 Gm8520-201ENSMUST00000186517 868 ntBASIC17.22■□□□□ 0.35
Pja1O55176 Gm18421-201ENSMUST00000204122 625 ntBASIC17.22■□□□□ 0.35
Pja1O55176 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pja1O55176 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pja1O55176 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pja1O55176 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pja1O55176 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pja1O55176 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pja1O55176 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pja1O55176 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pja1O55176 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pja1O55176 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pja1O55176 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
Pja1O55176 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pja1O55176 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pja1O55176 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Pja1O55176 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pja1O55176 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pja1O55176 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pja1O55176 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pja1O55176 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pja1O55176 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pja1O55176 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pja1O55176 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.21■□□□□ 0.35
Pja1O55176 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pja1O55176 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.21■□□□□ 0.35
Pja1O55176 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Pja1O55176 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pja1O55176 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pja1O55176 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pja1O55176 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.21■□□□□ 0.35
Pja1O55176 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pja1O55176 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pja1O55176 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pja1O55176 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pja1O55176 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.21■□□□□ 0.35
Pja1O55176 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Pja1O55176 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Pja1O55176 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pja1O55176 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pja1O55176 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pja1O55176 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.2■□□□□ 0.34
Pja1O55176 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pja1O55176 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pja1O55176 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pja1O55176 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.2■□□□□ 0.34
Pja1O55176 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pja1O55176 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pja1O55176 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.2■□□□□ 0.34
Pja1O55176 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pja1O55176 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pja1O55176 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.2■□□□□ 0.34
Pja1O55176 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.2■□□□□ 0.34
Pja1O55176 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pja1O55176 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pja1O55176 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pja1O55176 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pja1O55176 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pja1O55176 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pja1O55176 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pja1O55176 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.2■□□□□ 0.34
Pja1O55176 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pja1O55176 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pja1O55176 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pja1O55176 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pja1O55176 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Pja1O55176 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Pja1O55176 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pja1O55176 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pja1O55176 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pja1O55176 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pja1O55176 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pja1O55176 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.19■□□□□ 0.34
Pja1O55176 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.19■□□□□ 0.34
Pja1O55176 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.19■□□□□ 0.34
Pja1O55176 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pja1O55176 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pja1O55176 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.19■□□□□ 0.34
Pja1O55176 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pja1O55176 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pja1O55176 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pja1O55176 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pja1O55176 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pja1O55176 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pja1O55176 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pja1O55176 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Pja1O55176 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pja1O55176 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.19■□□□□ 0.34
Pja1O55176 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.18■□□□□ 0.34
Pja1O55176 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pja1O55176 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Pja1O55176 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pja1O55176 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
Pja1O55176 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pja1O55176 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pja1O55176 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Pja1O55176 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms