Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1bO55017 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cacna1bO55017 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Cacna1bO55017 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1bO55017 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.67■□□□□ 0.1
Cacna1bO55017 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1bO55017 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1bO55017 Mir8117-201ENSMUST00000184773 107 ntBASIC15.67■□□□□ 0.1
Cacna1bO55017 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.67■□□□□ 0.1
Cacna1bO55017 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.67■□□□□ 0.1
Cacna1bO55017 Gm8655-201ENSMUST00000221159 852 ntBASIC15.67■□□□□ 0.1
Cacna1bO55017 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1bO55017 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.67■□□□□ 0.1
Cacna1bO55017 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1bO55017 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1bO55017 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1bO55017 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1bO55017 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1bO55017 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1bO55017 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1bO55017 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1bO55017 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1bO55017 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1bO55017 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.67■□□□□ 0.1
Cacna1bO55017 Gm44872-201ENSMUST00000207864 420 ntBASIC15.67■□□□□ 0.1
Cacna1bO55017 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.67■□□□□ 0.1
Cacna1bO55017 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Cacna1bO55017 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1bO55017 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1bO55017 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1bO55017 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1bO55017 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.67■□□□□ 0.1
Cacna1bO55017 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1bO55017 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1bO55017 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1bO55017 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.66■□□□□ 0.1
Cacna1bO55017 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1bO55017 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1bO55017 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1bO55017 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1bO55017 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Cacna1bO55017 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1bO55017 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1bO55017 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.66■□□□□ 0.1
Cacna1bO55017 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1bO55017 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1bO55017 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Cacna1bO55017 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1bO55017 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1bO55017 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1bO55017 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Cacna1bO55017 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.66■□□□□ 0.1
Cacna1bO55017 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.66■□□□□ 0.1
Cacna1bO55017 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cacna1bO55017 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cacna1bO55017 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cacna1bO55017 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Cacna1bO55017 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cacna1bO55017 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cacna1bO55017 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.65■□□□□ 0.1
Cacna1bO55017 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cacna1bO55017 Wdyhv1-206ENSMUST00000227142 786 ntBASIC15.65■□□□□ 0.1
Cacna1bO55017 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cacna1bO55017 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cacna1bO55017 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cacna1bO55017 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.65■□□□□ 0.1
Cacna1bO55017 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.65■□□□□ 0.1
Cacna1bO55017 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cacna1bO55017 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cacna1bO55017 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.65■□□□□ 0.1
Cacna1bO55017 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1bO55017 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.64■□□□□ 0.09
Cacna1bO55017 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1bO55017 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Cacna1bO55017 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1bO55017 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1bO55017 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1bO55017 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.64■□□□□ 0.09
Cacna1bO55017 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.64■□□□□ 0.09
Cacna1bO55017 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.64■□□□□ 0.09
Cacna1bO55017 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1bO55017 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.64■□□□□ 0.09
Cacna1bO55017 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.64■□□□□ 0.09
Cacna1bO55017 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1bO55017 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1bO55017 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cacna1bO55017 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cacna1bO55017 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.63■□□□□ 0.09
Cacna1bO55017 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.63■□□□□ 0.09
Cacna1bO55017 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.63■□□□□ 0.09
Cacna1bO55017 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cacna1bO55017 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cacna1bO55017 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cacna1bO55017 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.63■□□□□ 0.09
Cacna1bO55017 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cacna1bO55017 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cacna1bO55017 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cacna1bO55017 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cacna1bO55017 Gm5186-201ENSMUST00000218781 920 ntBASIC15.63■□□□□ 0.09
Cacna1bO55017 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms