Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smarce1O54941 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.38■□□□□ 0.69
Smarce1O54941 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smarce1O54941 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarce1O54941 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarce1O54941 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarce1O54941 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarce1O54941 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarce1O54941 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarce1O54941 Gm10812-201ENSMUST00000099864 546 ntBASIC19.38■□□□□ 0.69
Smarce1O54941 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarce1O54941 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarce1O54941 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarce1O54941 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smarce1O54941 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smarce1O54941 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smarce1O54941 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarce1O54941 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Smarce1O54941 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarce1O54941 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarce1O54941 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smarce1O54941 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC19.37■□□□□ 0.69
Smarce1O54941 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarce1O54941 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smarce1O54941 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.37■□□□□ 0.69
Smarce1O54941 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.37■□□□□ 0.69
Smarce1O54941 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.37■□□□□ 0.69
Smarce1O54941 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarce1O54941 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarce1O54941 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smarce1O54941 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarce1O54941 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smarce1O54941 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Smarce1O54941 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC19.37■□□□□ 0.69
Smarce1O54941 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarce1O54941 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smarce1O54941 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarce1O54941 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarce1O54941 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarce1O54941 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Smarce1O54941 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.36■□□□□ 0.69
Smarce1O54941 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Smarce1O54941 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarce1O54941 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.36■□□□□ 0.69
Smarce1O54941 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Smarce1O54941 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Smarce1O54941 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarce1O54941 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Smarce1O54941 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC19.36■□□□□ 0.69
Smarce1O54941 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC19.36■□□□□ 0.69
Smarce1O54941 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarce1O54941 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarce1O54941 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarce1O54941 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Smarce1O54941 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarce1O54941 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarce1O54941 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smarce1O54941 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarce1O54941 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smarce1O54941 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarce1O54941 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarce1O54941 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.35■□□□□ 0.69
Smarce1O54941 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC19.35■□□□□ 0.69
Smarce1O54941 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smarce1O54941 Gm7370-201ENSMUST00000219471 767 ntBASIC19.35■□□□□ 0.69
Smarce1O54941 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarce1O54941 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Smarce1O54941 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarce1O54941 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarce1O54941 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarce1O54941 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarce1O54941 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarce1O54941 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smarce1O54941 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Smarce1O54941 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarce1O54941 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smarce1O54941 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarce1O54941 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smarce1O54941 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarce1O54941 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarce1O54941 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarce1O54941 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smarce1O54941 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Smarce1O54941 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarce1O54941 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarce1O54941 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.34■□□□□ 0.69
Smarce1O54941 Gm16061-201ENSMUST00000122167 857 ntBASIC19.34■□□□□ 0.69
Smarce1O54941 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
Smarce1O54941 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.34■□□□□ 0.69
Smarce1O54941 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarce1O54941 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarce1O54941 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarce1O54941 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smarce1O54941 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarce1O54941 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Smarce1O54941 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Smarce1O54941 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smarce1O54941 CT010478.1-201ENSMUST00000220747 2787 ntBASIC19.33■□□□□ 0.69
Smarce1O54941 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smarce1O54941 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms