Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccr6O54689 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC13.72□□□□□ -0.21
Ccr6O54689 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.72□□□□□ -0.21
Ccr6O54689 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccr6O54689 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccr6O54689 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccr6O54689 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.72□□□□□ -0.21
Ccr6O54689 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccr6O54689 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ccr6O54689 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ccr6O54689 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccr6O54689 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ccr6O54689 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccr6O54689 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccr6O54689 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ccr6O54689 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ccr6O54689 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ccr6O54689 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccr6O54689 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
Ccr6O54689 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccr6O54689 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccr6O54689 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.71□□□□□ -0.21
Ccr6O54689 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Ccr6O54689 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccr6O54689 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccr6O54689 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccr6O54689 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
Ccr6O54689 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccr6O54689 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccr6O54689 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccr6O54689 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccr6O54689 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.71□□□□□ -0.21
Ccr6O54689 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccr6O54689 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccr6O54689 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccr6O54689 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccr6O54689 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC13.71□□□□□ -0.21
Ccr6O54689 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccr6O54689 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Ccr6O54689 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccr6O54689 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccr6O54689 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Ccr6O54689 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccr6O54689 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.71□□□□□ -0.22
Ccr6O54689 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccr6O54689 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccr6O54689 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ccr6O54689 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ccr6O54689 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Ccr6O54689 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.71□□□□□ -0.22
Ccr6O54689 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccr6O54689 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccr6O54689 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccr6O54689 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccr6O54689 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccr6O54689 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Ccr6O54689 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccr6O54689 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccr6O54689 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccr6O54689 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccr6O54689 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccr6O54689 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccr6O54689 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccr6O54689 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccr6O54689 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccr6O54689 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC13.7□□□□□ -0.22
Ccr6O54689 Alkbh1-212ENSMUST00000185301 408 ntBASIC13.7□□□□□ -0.22
Ccr6O54689 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
Ccr6O54689 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccr6O54689 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccr6O54689 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccr6O54689 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccr6O54689 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccr6O54689 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccr6O54689 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Ccr6O54689 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccr6O54689 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.7□□□□□ -0.22
Ccr6O54689 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccr6O54689 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccr6O54689 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccr6O54689 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccr6O54689 BC037039-201ENSMUST00000192003 2205 ntBASIC13.7□□□□□ -0.22
Ccr6O54689 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccr6O54689 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccr6O54689 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccr6O54689 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Ccr6O54689 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ccr6O54689 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccr6O54689 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccr6O54689 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.69□□□□□ -0.22
Ccr6O54689 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ccr6O54689 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccr6O54689 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccr6O54689 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccr6O54689 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccr6O54689 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccr6O54689 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccr6O54689 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.69□□□□□ -0.22
Ccr6O54689 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccr6O54689 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms