Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6bO35451 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6bO35451 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6bO35451 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6bO35451 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6bO35451 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.17□□□□□ -0.14
Atf6bO35451 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6bO35451 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Atf6bO35451 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6bO35451 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Atf6bO35451 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6bO35451 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6bO35451 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6bO35451 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6bO35451 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Atf6bO35451 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atf6bO35451 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.17□□□□□ -0.14
Atf6bO35451 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Atf6bO35451 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atf6bO35451 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atf6bO35451 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atf6bO35451 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Atf6bO35451 Phf7-203ENSMUST00000226565 1971 ntBASIC14.16□□□□□ -0.14
Atf6bO35451 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Atf6bO35451 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atf6bO35451 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atf6bO35451 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atf6bO35451 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.16□□□□□ -0.14
Atf6bO35451 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atf6bO35451 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Atf6bO35451 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atf6bO35451 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atf6bO35451 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atf6bO35451 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atf6bO35451 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Atf6bO35451 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Atf6bO35451 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Atf6bO35451 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atf6bO35451 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atf6bO35451 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atf6bO35451 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Atf6bO35451 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Atf6bO35451 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.15□□□□□ -0.14
Atf6bO35451 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atf6bO35451 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atf6bO35451 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atf6bO35451 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Atf6bO35451 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atf6bO35451 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atf6bO35451 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Atf6bO35451 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atf6bO35451 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Atf6bO35451 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Atf6bO35451 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atf6bO35451 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atf6bO35451 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atf6bO35451 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Atf6bO35451 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Atf6bO35451 Gm9013-201ENSMUST00000132939 882 ntBASIC14.15□□□□□ -0.14
Atf6bO35451 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Atf6bO35451 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.15□□□□□ -0.14
Atf6bO35451 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Atf6bO35451 Gm37722-201ENSMUST00000193757 208 ntBASIC14.15□□□□□ -0.14
Atf6bO35451 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.15□□□□□ -0.14
Atf6bO35451 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atf6bO35451 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Atf6bO35451 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atf6bO35451 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atf6bO35451 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atf6bO35451 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atf6bO35451 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atf6bO35451 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Atf6bO35451 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atf6bO35451 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atf6bO35451 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atf6bO35451 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atf6bO35451 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atf6bO35451 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.14□□□□□ -0.15
Atf6bO35451 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Atf6bO35451 Gm25016-201ENSMUST00000158399 131 ntBASIC14.14□□□□□ -0.15
Atf6bO35451 Gm5587-201ENSMUST00000206270 674 ntBASIC14.14□□□□□ -0.15
Atf6bO35451 Gm18115-201ENSMUST00000221209 621 ntBASIC14.14□□□□□ -0.15
Atf6bO35451 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.14□□□□□ -0.15
Atf6bO35451 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Atf6bO35451 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Atf6bO35451 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Atf6bO35451 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atf6bO35451 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atf6bO35451 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atf6bO35451 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.14□□□□□ -0.15
Atf6bO35451 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Atf6bO35451 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atf6bO35451 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Atf6bO35451 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Atf6bO35451 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Atf6bO35451 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atf6bO35451 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atf6bO35451 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atf6bO35451 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atf6bO35451 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms