Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cpsf2O35218 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.44■□□□□ 0.38
Cpsf2O35218 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Cpsf2O35218 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpsf2O35218 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Cpsf2O35218 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpsf2O35218 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpsf2O35218 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cpsf2O35218 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpsf2O35218 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpsf2O35218 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Cpsf2O35218 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.43■□□□□ 0.38
Cpsf2O35218 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf2O35218 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Cpsf2O35218 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf2O35218 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Cpsf2O35218 Actl10-202ENSMUST00000226583 1501 ntBASIC17.43■□□□□ 0.38
Cpsf2O35218 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf2O35218 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.43■□□□□ 0.38
Cpsf2O35218 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf2O35218 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf2O35218 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf2O35218 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf2O35218 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf2O35218 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.43■□□□□ 0.38
Cpsf2O35218 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf2O35218 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf2O35218 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf2O35218 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.43■□□□□ 0.38
Cpsf2O35218 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf2O35218 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf2O35218 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Cpsf2O35218 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Cpsf2O35218 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf2O35218 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf2O35218 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpsf2O35218 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Cpsf2O35218 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf2O35218 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf2O35218 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf2O35218 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.42■□□□□ 0.38
Cpsf2O35218 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Cpsf2O35218 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.42■□□□□ 0.38
Cpsf2O35218 Gm7370-201ENSMUST00000219471 767 ntBASIC17.42■□□□□ 0.38
Cpsf2O35218 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf2O35218 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf2O35218 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Cpsf2O35218 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Cpsf2O35218 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf2O35218 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf2O35218 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf2O35218 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpsf2O35218 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Cpsf2O35218 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpsf2O35218 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpsf2O35218 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.41■□□□□ 0.38
Cpsf2O35218 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpsf2O35218 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpsf2O35218 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
Cpsf2O35218 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cpsf2O35218 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.41■□□□□ 0.38
Cpsf2O35218 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cpsf2O35218 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.41■□□□□ 0.38
Cpsf2O35218 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Cpsf2O35218 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpsf2O35218 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Cpsf2O35218 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpsf2O35218 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpsf2O35218 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpsf2O35218 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpsf2O35218 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cpsf2O35218 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpsf2O35218 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpsf2O35218 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpsf2O35218 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.41■□□□□ 0.38
Cpsf2O35218 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpsf2O35218 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpsf2O35218 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Cpsf2O35218 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Cpsf2O35218 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Cpsf2O35218 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cpsf2O35218 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cpsf2O35218 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cpsf2O35218 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cpsf2O35218 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cpsf2O35218 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cpsf2O35218 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cpsf2O35218 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cpsf2O35218 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cpsf2O35218 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cpsf2O35218 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cpsf2O35218 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cpsf2O35218 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.4■□□□□ 0.38
Cpsf2O35218 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cpsf2O35218 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cpsf2O35218 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cpsf2O35218 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cpsf2O35218 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.4■□□□□ 0.38
Cpsf2O35218 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cpsf2O35218 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms