Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Trove2O08848 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trove2O08848 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trove2O08848 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trove2O08848 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Trove2O08848 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trove2O08848 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trove2O08848 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.75■□□□□ 0.27
Trove2O08848 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trove2O08848 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trove2O08848 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trove2O08848 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trove2O08848 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trove2O08848 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trove2O08848 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trove2O08848 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trove2O08848 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trove2O08848 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Trove2O08848 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.74■□□□□ 0.27
Trove2O08848 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trove2O08848 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trove2O08848 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trove2O08848 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trove2O08848 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trove2O08848 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trove2O08848 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trove2O08848 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trove2O08848 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Trove2O08848 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trove2O08848 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.74■□□□□ 0.27
Trove2O08848 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trove2O08848 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trove2O08848 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trove2O08848 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trove2O08848 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.73■□□□□ 0.27
Trove2O08848 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trove2O08848 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trove2O08848 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trove2O08848 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trove2O08848 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trove2O08848 Gm27011-201ENSMUST00000182352 972 ntBASIC16.73■□□□□ 0.27
Trove2O08848 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.73■□□□□ 0.27
Trove2O08848 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.73■□□□□ 0.27
Trove2O08848 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.73■□□□□ 0.27
Trove2O08848 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trove2O08848 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trove2O08848 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trove2O08848 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trove2O08848 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Trove2O08848 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Trove2O08848 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trove2O08848 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trove2O08848 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Trove2O08848 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trove2O08848 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trove2O08848 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trove2O08848 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trove2O08848 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.72■□□□□ 0.27
Trove2O08848 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trove2O08848 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trove2O08848 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.72■□□□□ 0.27
Trove2O08848 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.72■□□□□ 0.27
Trove2O08848 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trove2O08848 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trove2O08848 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trove2O08848 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trove2O08848 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trove2O08848 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trove2O08848 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Trove2O08848 Gm24841-201ENSMUST00000158676 357 ntBASIC16.72■□□□□ 0.27
Trove2O08848 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.72■□□□□ 0.27
Trove2O08848 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trove2O08848 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.72■□□□□ 0.27
Trove2O08848 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trove2O08848 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trove2O08848 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trove2O08848 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trove2O08848 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trove2O08848 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trove2O08848 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trove2O08848 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.71■□□□□ 0.27
Trove2O08848 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trove2O08848 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trove2O08848 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trove2O08848 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trove2O08848 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Trove2O08848 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trove2O08848 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trove2O08848 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trove2O08848 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trove2O08848 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trove2O08848 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trove2O08848 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trove2O08848 Gm22240-201ENSMUST00000175225 82 ntBASIC16.71■□□□□ 0.27
Trove2O08848 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trove2O08848 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trove2O08848 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trove2O08848 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trove2O08848 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trove2O08848 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms