Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Ercc2O08811 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ercc2O08811 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ercc2O08811 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ercc2O08811 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ercc2O08811 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ercc2O08811 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ercc2O08811 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ercc2O08811 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ercc2O08811 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ercc2O08811 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ercc2O08811 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ercc2O08811 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ercc2O08811 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ercc2O08811 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Ercc2O08811 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ercc2O08811 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Ercc2O08811 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ercc2O08811 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ercc2O08811 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.68■□□□□ 0.26
Ercc2O08811 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Ercc2O08811 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ercc2O08811 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ercc2O08811 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ercc2O08811 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ercc2O08811 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ercc2O08811 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ercc2O08811 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ercc2O08811 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ercc2O08811 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ercc2O08811 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ercc2O08811 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ercc2O08811 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.68■□□□□ 0.26
Ercc2O08811 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.68■□□□□ 0.26
Ercc2O08811 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Ercc2O08811 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ercc2O08811 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ercc2O08811 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Ercc2O08811 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Ercc2O08811 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ercc2O08811 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ercc2O08811 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ercc2O08811 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ercc2O08811 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ercc2O08811 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ercc2O08811 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ercc2O08811 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ercc2O08811 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Ercc2O08811 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ercc2O08811 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ercc2O08811 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Ercc2O08811 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Ercc2O08811 Gm44430-201ENSMUST00000203376 995 ntBASIC16.67■□□□□ 0.26
Ercc2O08811 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ercc2O08811 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.67■□□□□ 0.26
Ercc2O08811 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ercc2O08811 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ercc2O08811 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ercc2O08811 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ercc2O08811 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.67■□□□□ 0.26
Ercc2O08811 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ercc2O08811 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ercc2O08811 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ercc2O08811 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ercc2O08811 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ercc2O08811 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Ercc2O08811 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ercc2O08811 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ercc2O08811 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ercc2O08811 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ercc2O08811 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ercc2O08811 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ercc2O08811 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ercc2O08811 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.66■□□□□ 0.26
Ercc2O08811 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ercc2O08811 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ercc2O08811 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ercc2O08811 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.66■□□□□ 0.26
Ercc2O08811 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ercc2O08811 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ercc2O08811 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Ercc2O08811 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ercc2O08811 Gm45328-201ENSMUST00000210942 917 ntBASIC16.66■□□□□ 0.26
Ercc2O08811 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ercc2O08811 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ercc2O08811 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ercc2O08811 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.66■□□□□ 0.26
Ercc2O08811 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ercc2O08811 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ercc2O08811 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
Ercc2O08811 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ercc2O08811 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ercc2O08811 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ercc2O08811 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ercc2O08811 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ercc2O08811 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ercc2O08811 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ercc2O08811 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ercc2O08811 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ercc2O08811 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms