Protein–RNA interactions for Protein: O08788

Dctn1, Dynactin subunit 1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dctn1O08788 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Dctn1O08788 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Dctn1O08788 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Dctn1O08788 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC20.05■□□□□ 0.8
Dctn1O08788 Gm8655-201ENSMUST00000221159 852 ntBASIC20.05■□□□□ 0.8
Dctn1O08788 AC154757.1-201ENSMUST00000228289 336 ntBASIC20.05■□□□□ 0.8
Dctn1O08788 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Dctn1O08788 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Dctn1O08788 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Dctn1O08788 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.05■□□□□ 0.8
Dctn1O08788 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Dctn1O08788 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Dctn1O08788 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Dctn1O08788 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Dctn1O08788 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Dctn1O08788 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Dctn1O08788 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Dctn1O08788 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Dctn1O08788 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Dctn1O08788 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Dctn1O08788 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Dctn1O08788 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC20.04■□□□□ 0.8
Dctn1O08788 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC20.04■□□□□ 0.8
Dctn1O08788 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Dctn1O08788 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC20.04■□□□□ 0.8
Dctn1O08788 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Dctn1O08788 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Dctn1O08788 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20.04■□□□□ 0.8
Dctn1O08788 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Dctn1O08788 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Dctn1O08788 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Dctn1O08788 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Dctn1O08788 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Dctn1O08788 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Dctn1O08788 Gm13036-201ENSMUST00000117799 748 ntBASIC20.03■□□□□ 0.8
Dctn1O08788 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Dctn1O08788 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC20.03■□□□□ 0.8
Dctn1O08788 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Dctn1O08788 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Dctn1O08788 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC20.03■□□□□ 0.8
Dctn1O08788 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Dctn1O08788 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Dctn1O08788 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Dctn1O08788 Gm37500-201ENSMUST00000192059 1443 ntBASIC20.02■□□□□ 0.8
Dctn1O08788 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Dctn1O08788 Rarb-207ENSMUST00000225921 2756 ntBASIC20.02■□□□□ 0.8
Dctn1O08788 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.02■□□□□ 0.8
Dctn1O08788 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC20.02■□□□□ 0.8
Dctn1O08788 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
Dctn1O08788 Gm27702-201ENSMUST00000184512 56 ntBASIC20.02■□□□□ 0.8
Dctn1O08788 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Dctn1O08788 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Dctn1O08788 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Dctn1O08788 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Dctn1O08788 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Dctn1O08788 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Dctn1O08788 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Dctn1O08788 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Dctn1O08788 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Dctn1O08788 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Dctn1O08788 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.01■□□□□ 0.79
Dctn1O08788 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Dctn1O08788 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Dctn1O08788 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Dctn1O08788 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Dctn1O08788 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC20.01■□□□□ 0.79
Dctn1O08788 Gm4995-201ENSMUST00000117247 432 ntBASIC20.01■□□□□ 0.79
Dctn1O08788 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Dctn1O08788 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC20.01■□□□□ 0.79
Dctn1O08788 Gm25406-201ENSMUST00000157599 105 ntBASIC20.01■□□□□ 0.79
Dctn1O08788 Gm43935-201ENSMUST00000203569 1050 ntBASIC20.01■□□□□ 0.79
Dctn1O08788 CT943659.1-201ENSMUST00000215459 326 ntBASIC20.01■□□□□ 0.79
Dctn1O08788 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Dctn1O08788 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Dctn1O08788 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Dctn1O08788 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Dctn1O08788 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Dctn1O08788 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC20.01■□□□□ 0.79
Dctn1O08788 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Dctn1O08788 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Dctn1O08788 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC20■□□□□ 0.79
Dctn1O08788 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC20■□□□□ 0.79
Dctn1O08788 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Dctn1O08788 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Dctn1O08788 Ddx41-204ENSMUST00000224765 2199 ntBASIC20■□□□□ 0.79
Dctn1O08788 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Dctn1O08788 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Dctn1O08788 Gm14494-201ENSMUST00000118786 435 ntBASIC20■□□□□ 0.79
Dctn1O08788 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC20■□□□□ 0.79
Dctn1O08788 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC20■□□□□ 0.79
Dctn1O08788 Gm9172-201ENSMUST00000212092 954 ntBASIC20■□□□□ 0.79
Dctn1O08788 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC20■□□□□ 0.79
Dctn1O08788 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC20■□□□□ 0.79
Dctn1O08788 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Dctn1O08788 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20■□□□□ 0.79
Dctn1O08788 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC20■□□□□ 0.79
Dctn1O08788 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Dctn1O08788 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Dctn1O08788 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Dctn1O08788 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms