Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Polr2jO08740 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Polr2jO08740 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Polr2jO08740 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Polr2jO08740 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Polr2jO08740 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Polr2jO08740 Gm20760-201ENSMUST00000179197 648 ntBASIC15.64■□□□□ 0.09
Polr2jO08740 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Polr2jO08740 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Polr2jO08740 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Polr2jO08740 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Polr2jO08740 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Polr2jO08740 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Polr2jO08740 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Polr2jO08740 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Polr2jO08740 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.64■□□□□ 0.09
Polr2jO08740 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Polr2jO08740 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Polr2jO08740 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.63■□□□□ 0.09
Polr2jO08740 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Polr2jO08740 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Polr2jO08740 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Polr2jO08740 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Polr2jO08740 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Polr2jO08740 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Polr2jO08740 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Polr2jO08740 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Polr2jO08740 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Polr2jO08740 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.63■□□□□ 0.09
Polr2jO08740 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC15.63■□□□□ 0.09
Polr2jO08740 Gm10653-202ENSMUST00000139570 835 ntBASIC15.63■□□□□ 0.09
Polr2jO08740 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Polr2jO08740 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Polr2jO08740 Gm3375-201ENSMUST00000203929 796 ntBASIC15.63■□□□□ 0.09
Polr2jO08740 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.63■□□□□ 0.09
Polr2jO08740 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Polr2jO08740 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Polr2jO08740 Prob1-201ENSMUST00000097619 3021 ntBASIC15.63■□□□□ 0.09
Polr2jO08740 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Polr2jO08740 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Polr2jO08740 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Polr2jO08740 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Polr2jO08740 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Polr2jO08740 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Polr2jO08740 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Polr2jO08740 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Polr2jO08740 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Polr2jO08740 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Polr2jO08740 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Polr2jO08740 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Polr2jO08740 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Polr2jO08740 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Polr2jO08740 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Polr2jO08740 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Polr2jO08740 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Polr2jO08740 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Polr2jO08740 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Polr2jO08740 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Polr2jO08740 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Polr2jO08740 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Polr2jO08740 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Polr2jO08740 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
Polr2jO08740 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Polr2jO08740 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Polr2jO08740 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Polr2jO08740 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Polr2jO08740 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Polr2jO08740 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.62■□□□□ 0.09
Polr2jO08740 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Polr2jO08740 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Polr2jO08740 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Polr2jO08740 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.62■□□□□ 0.09
Polr2jO08740 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Polr2jO08740 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Polr2jO08740 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.61■□□□□ 0.09
Polr2jO08740 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Polr2jO08740 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Polr2jO08740 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Polr2jO08740 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Polr2jO08740 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.61■□□□□ 0.09
Polr2jO08740 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
Polr2jO08740 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Polr2jO08740 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Polr2jO08740 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Polr2jO08740 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.61■□□□□ 0.09
Polr2jO08740 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Polr2jO08740 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Polr2jO08740 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Polr2jO08740 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.61■□□□□ 0.09
Polr2jO08740 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Polr2jO08740 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Polr2jO08740 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC15.61■□□□□ 0.09
Polr2jO08740 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Polr2jO08740 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Polr2jO08740 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Polr2jO08740 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
Polr2jO08740 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.61■□□□□ 0.09
Polr2jO08740 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
Polr2jO08740 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Polr2jO08740 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms