Protein–RNA interactions for Protein: O08604

Raet1c, Retinoic acid early-inducible protein 1-gamma, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1cO08604 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Raet1cO08604 Gm18032-201ENSMUST00000222541 538 ntBASIC14.56□□□□□ -0.08
Raet1cO08604 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.56□□□□□ -0.08
Raet1cO08604 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Raet1cO08604 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Raet1cO08604 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Raet1cO08604 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Raet1cO08604 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Raet1cO08604 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Raet1cO08604 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Raet1cO08604 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Raet1cO08604 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Raet1cO08604 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.56□□□□□ -0.08
Raet1cO08604 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Raet1cO08604 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Raet1cO08604 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Raet1cO08604 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Raet1cO08604 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Raet1cO08604 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.55□□□□□ -0.08
Raet1cO08604 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Raet1cO08604 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Raet1cO08604 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Raet1cO08604 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Raet1cO08604 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Raet1cO08604 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.55□□□□□ -0.08
Raet1cO08604 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Raet1cO08604 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Raet1cO08604 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Raet1cO08604 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Raet1cO08604 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Raet1cO08604 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Raet1cO08604 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Raet1cO08604 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Raet1cO08604 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Raet1cO08604 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Raet1cO08604 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Raet1cO08604 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Raet1cO08604 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.55□□□□□ -0.08
Raet1cO08604 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Raet1cO08604 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Raet1cO08604 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Raet1cO08604 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Raet1cO08604 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Raet1cO08604 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.55□□□□□ -0.08
Raet1cO08604 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Raet1cO08604 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Raet1cO08604 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Raet1cO08604 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Raet1cO08604 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Raet1cO08604 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Raet1cO08604 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Raet1cO08604 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Raet1cO08604 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Raet1cO08604 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.54□□□□□ -0.08
Raet1cO08604 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.54□□□□□ -0.08
Raet1cO08604 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Raet1cO08604 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Raet1cO08604 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Raet1cO08604 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Raet1cO08604 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Raet1cO08604 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Raet1cO08604 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.54□□□□□ -0.08
Raet1cO08604 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.54□□□□□ -0.08
Raet1cO08604 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Raet1cO08604 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Raet1cO08604 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Raet1cO08604 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Raet1cO08604 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Raet1cO08604 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Raet1cO08604 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Raet1cO08604 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Raet1cO08604 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.53□□□□□ -0.08
Raet1cO08604 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Raet1cO08604 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Raet1cO08604 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Raet1cO08604 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Raet1cO08604 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Raet1cO08604 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Raet1cO08604 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Raet1cO08604 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Raet1cO08604 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Raet1cO08604 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Raet1cO08604 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Raet1cO08604 Gm10231-201ENSMUST00000181584 441 ntBASIC14.53□□□□□ -0.08
Raet1cO08604 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Raet1cO08604 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.53□□□□□ -0.08
Raet1cO08604 Gm37722-201ENSMUST00000193757 208 ntBASIC14.53□□□□□ -0.08
Raet1cO08604 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Raet1cO08604 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Raet1cO08604 Gm10175-202ENSMUST00000208752 441 ntBASIC14.53□□□□□ -0.08
Raet1cO08604 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.53□□□□□ -0.08
Raet1cO08604 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Raet1cO08604 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Raet1cO08604 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Raet1cO08604 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Raet1cO08604 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Raet1cO08604 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.53□□□□□ -0.08
Raet1cO08604 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Raet1cO08604 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Raet1cO08604 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms