Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp35M0QWN7 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp35M0QWN7 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp35M0QWN7 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.45■□□□□ 0.38
Usp35M0QWN7 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp35M0QWN7 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Usp35M0QWN7 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Usp35M0QWN7 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Usp35M0QWN7 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp35M0QWN7 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp35M0QWN7 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp35M0QWN7 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Usp35M0QWN7 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Usp35M0QWN7 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp35M0QWN7 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Usp35M0QWN7 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Usp35M0QWN7 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Usp35M0QWN7 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp35M0QWN7 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Usp35M0QWN7 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp35M0QWN7 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp35M0QWN7 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp35M0QWN7 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp35M0QWN7 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Usp35M0QWN7 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp35M0QWN7 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp35M0QWN7 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp35M0QWN7 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Usp35M0QWN7 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.44■□□□□ 0.38
Usp35M0QWN7 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp35M0QWN7 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.44■□□□□ 0.38
Usp35M0QWN7 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Usp35M0QWN7 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Usp35M0QWN7 Gm44771-201ENSMUST00000206975 626 ntBASIC17.44■□□□□ 0.38
Usp35M0QWN7 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.44■□□□□ 0.38
Usp35M0QWN7 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.44■□□□□ 0.38
Usp35M0QWN7 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp35M0QWN7 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC17.44■□□□□ 0.38
Usp35M0QWN7 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp35M0QWN7 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Usp35M0QWN7 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.44■□□□□ 0.38
Usp35M0QWN7 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Usp35M0QWN7 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Usp35M0QWN7 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Usp35M0QWN7 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp35M0QWN7 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp35M0QWN7 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp35M0QWN7 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.43■□□□□ 0.38
Usp35M0QWN7 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Usp35M0QWN7 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.43■□□□□ 0.38
Usp35M0QWN7 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp35M0QWN7 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Usp35M0QWN7 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp35M0QWN7 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Usp35M0QWN7 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp35M0QWN7 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp35M0QWN7 Gm24589-201ENSMUST00000116692 94 ntBASIC17.43■□□□□ 0.38
Usp35M0QWN7 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Usp35M0QWN7 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Usp35M0QWN7 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Usp35M0QWN7 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.43■□□□□ 0.38
Usp35M0QWN7 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Usp35M0QWN7 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Usp35M0QWN7 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp35M0QWN7 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp35M0QWN7 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Usp35M0QWN7 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Usp35M0QWN7 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp35M0QWN7 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp35M0QWN7 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Usp35M0QWN7 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp35M0QWN7 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Usp35M0QWN7 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp35M0QWN7 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Usp35M0QWN7 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Usp35M0QWN7 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp35M0QWN7 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp35M0QWN7 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp35M0QWN7 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp35M0QWN7 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp35M0QWN7 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Usp35M0QWN7 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.42■□□□□ 0.38
Usp35M0QWN7 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp35M0QWN7 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Usp35M0QWN7 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp35M0QWN7 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.42■□□□□ 0.38
Usp35M0QWN7 Phf7-203ENSMUST00000226565 1971 ntBASIC17.42■□□□□ 0.38
Usp35M0QWN7 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp35M0QWN7 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp35M0QWN7 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp35M0QWN7 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Usp35M0QWN7 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp35M0QWN7 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp35M0QWN7 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp35M0QWN7 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp35M0QWN7 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.41■□□□□ 0.38
Usp35M0QWN7 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Usp35M0QWN7 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp35M0QWN7 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp35M0QWN7 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms