Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gm9731-201ENSMUST00000209480 747 ntBASIC14.91□□□□□ -0.02
Shisa8J3QNX5 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shisa8J3QNX5 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Shisa8J3QNX5 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shisa8J3QNX5 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Shisa8J3QNX5 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shisa8J3QNX5 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shisa8J3QNX5 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.91□□□□□ -0.02
Shisa8J3QNX5 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shisa8J3QNX5 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shisa8J3QNX5 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Shisa8J3QNX5 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shisa8J3QNX5 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shisa8J3QNX5 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shisa8J3QNX5 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shisa8J3QNX5 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shisa8J3QNX5 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shisa8J3QNX5 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Shisa8J3QNX5 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Shisa8J3QNX5 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shisa8J3QNX5 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shisa8J3QNX5 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shisa8J3QNX5 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shisa8J3QNX5 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Shisa8J3QNX5 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC14.9□□□□□ -0.02
Shisa8J3QNX5 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.9□□□□□ -0.02
Shisa8J3QNX5 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shisa8J3QNX5 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Shisa8J3QNX5 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Shisa8J3QNX5 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Shisa8J3QNX5 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Shisa8J3QNX5 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.9□□□□□ -0.02
Shisa8J3QNX5 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shisa8J3QNX5 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shisa8J3QNX5 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Shisa8J3QNX5 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Shisa8J3QNX5 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shisa8J3QNX5 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Shisa8J3QNX5 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Shisa8J3QNX5 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.89□□□□□ -0.03
Shisa8J3QNX5 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shisa8J3QNX5 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Shisa8J3QNX5 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.89□□□□□ -0.03
Shisa8J3QNX5 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shisa8J3QNX5 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Shisa8J3QNX5 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.89□□□□□ -0.03
Shisa8J3QNX5 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.89□□□□□ -0.03
Shisa8J3QNX5 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Shisa8J3QNX5 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.89□□□□□ -0.03
Shisa8J3QNX5 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shisa8J3QNX5 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shisa8J3QNX5 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Shisa8J3QNX5 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Shisa8J3QNX5 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.89□□□□□ -0.03
Shisa8J3QNX5 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shisa8J3QNX5 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.89□□□□□ -0.03
Shisa8J3QNX5 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shisa8J3QNX5 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shisa8J3QNX5 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shisa8J3QNX5 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Shisa8J3QNX5 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shisa8J3QNX5 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.89□□□□□ -0.03
Shisa8J3QNX5 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shisa8J3QNX5 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shisa8J3QNX5 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shisa8J3QNX5 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shisa8J3QNX5 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shisa8J3QNX5 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shisa8J3QNX5 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shisa8J3QNX5 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Shisa8J3QNX5 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shisa8J3QNX5 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.88□□□□□ -0.03
Shisa8J3QNX5 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shisa8J3QNX5 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shisa8J3QNX5 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shisa8J3QNX5 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Shisa8J3QNX5 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shisa8J3QNX5 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shisa8J3QNX5 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.88□□□□□ -0.03
Shisa8J3QNX5 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shisa8J3QNX5 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC14.88□□□□□ -0.03
Shisa8J3QNX5 Gm7638-201ENSMUST00000121348 967 ntBASIC14.88□□□□□ -0.03
Shisa8J3QNX5 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Shisa8J3QNX5 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC14.88□□□□□ -0.03
Shisa8J3QNX5 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC14.88□□□□□ -0.03
Shisa8J3QNX5 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Shisa8J3QNX5 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Shisa8J3QNX5 Gm10602-201ENSMUST00000098239 609 ntBASIC14.88□□□□□ -0.03
Shisa8J3QNX5 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.88□□□□□ -0.03
Shisa8J3QNX5 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shisa8J3QNX5 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Shisa8J3QNX5 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shisa8J3QNX5 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Shisa8J3QNX5 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shisa8J3QNX5 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.88□□□□□ -0.03
Shisa8J3QNX5 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Shisa8J3QNX5 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shisa8J3QNX5 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shisa8J3QNX5 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shisa8J3QNX5 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms