Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim34bJ3QNR8 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim34bJ3QNR8 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim34bJ3QNR8 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim34bJ3QNR8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim34bJ3QNR8 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Trim34bJ3QNR8 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim34bJ3QNR8 AC132265.1-201ENSMUST00000219233 1665 ntBASIC19.87■□□□□ 0.77
Trim34bJ3QNR8 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim34bJ3QNR8 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim34bJ3QNR8 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim34bJ3QNR8 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim34bJ3QNR8 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Trim34bJ3QNR8 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim34bJ3QNR8 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC19.87■□□□□ 0.77
Trim34bJ3QNR8 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim34bJ3QNR8 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim34bJ3QNR8 Gm25990-201ENSMUST00000102440 86 ntBASIC19.87■□□□□ 0.77
Trim34bJ3QNR8 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC19.87■□□□□ 0.77
Trim34bJ3QNR8 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim34bJ3QNR8 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim34bJ3QNR8 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim34bJ3QNR8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim34bJ3QNR8 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trim34bJ3QNR8 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim34bJ3QNR8 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim34bJ3QNR8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.86■□□□□ 0.77
Trim34bJ3QNR8 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim34bJ3QNR8 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim34bJ3QNR8 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim34bJ3QNR8 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim34bJ3QNR8 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim34bJ3QNR8 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim34bJ3QNR8 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim34bJ3QNR8 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC19.86■□□□□ 0.77
Trim34bJ3QNR8 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim34bJ3QNR8 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim34bJ3QNR8 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim34bJ3QNR8 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim34bJ3QNR8 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim34bJ3QNR8 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim34bJ3QNR8 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim34bJ3QNR8 Gm8097-201ENSMUST00000117903 829 ntBASIC19.85■□□□□ 0.77
Trim34bJ3QNR8 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Trim34bJ3QNR8 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Trim34bJ3QNR8 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC19.85■□□□□ 0.77
Trim34bJ3QNR8 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC19.85■□□□□ 0.77
Trim34bJ3QNR8 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC19.85■□□□□ 0.77
Trim34bJ3QNR8 Gm37584-201ENSMUST00000193595 1290 ntBASIC19.85■□□□□ 0.77
Trim34bJ3QNR8 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim34bJ3QNR8 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim34bJ3QNR8 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim34bJ3QNR8 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim34bJ3QNR8 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim34bJ3QNR8 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim34bJ3QNR8 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim34bJ3QNR8 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim34bJ3QNR8 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim34bJ3QNR8 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim34bJ3QNR8 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim34bJ3QNR8 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim34bJ3QNR8 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim34bJ3QNR8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Trim34bJ3QNR8 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim34bJ3QNR8 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim34bJ3QNR8 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim34bJ3QNR8 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim34bJ3QNR8 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.84■□□□□ 0.77
Trim34bJ3QNR8 Gm12350-201ENSMUST00000121208 462 ntBASIC19.84■□□□□ 0.77
Trim34bJ3QNR8 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC19.84■□□□□ 0.77
Trim34bJ3QNR8 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Trim34bJ3QNR8 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim34bJ3QNR8 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC19.84■□□□□ 0.77
Trim34bJ3QNR8 Gm8655-201ENSMUST00000221159 852 ntBASIC19.84■□□□□ 0.77
Trim34bJ3QNR8 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim34bJ3QNR8 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
Trim34bJ3QNR8 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim34bJ3QNR8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim34bJ3QNR8 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim34bJ3QNR8 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim34bJ3QNR8 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Trim34bJ3QNR8 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim34bJ3QNR8 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim34bJ3QNR8 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim34bJ3QNR8 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim34bJ3QNR8 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim34bJ3QNR8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Trim34bJ3QNR8 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim34bJ3QNR8 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trim34bJ3QNR8 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim34bJ3QNR8 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Trim34bJ3QNR8 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim34bJ3QNR8 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim34bJ3QNR8 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trim34bJ3QNR8 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC19.83■□□□□ 0.77
Trim34bJ3QNR8 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trim34bJ3QNR8 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim34bJ3QNR8 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Trim34bJ3QNR8 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim34bJ3QNR8 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms