Protein–RNA interactions for Protein: H3BKP8

9930021J03Rik, RIKEN cDNA 9930021J03 gene, mousemouse

Predictions only

Length 2,027 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
9930021J03RikH3BKP8 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
9930021J03RikH3BKP8 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
9930021J03RikH3BKP8 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
9930021J03RikH3BKP8 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
9930021J03RikH3BKP8 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
9930021J03RikH3BKP8 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
9930021J03RikH3BKP8 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
9930021J03RikH3BKP8 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
9930021J03RikH3BKP8 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
9930021J03RikH3BKP8 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.19■□□□□ 0.02
9930021J03RikH3BKP8 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
9930021J03RikH3BKP8 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.19■□□□□ 0.02
9930021J03RikH3BKP8 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
9930021J03RikH3BKP8 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
9930021J03RikH3BKP8 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
9930021J03RikH3BKP8 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
9930021J03RikH3BKP8 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
9930021J03RikH3BKP8 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
9930021J03RikH3BKP8 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
9930021J03RikH3BKP8 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
9930021J03RikH3BKP8 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
9930021J03RikH3BKP8 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.19■□□□□ 0.02
9930021J03RikH3BKP8 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
9930021J03RikH3BKP8 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
9930021J03RikH3BKP8 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.19■□□□□ 0.02
9930021J03RikH3BKP8 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
9930021J03RikH3BKP8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
9930021J03RikH3BKP8 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
9930021J03RikH3BKP8 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
9930021J03RikH3BKP8 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
9930021J03RikH3BKP8 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
9930021J03RikH3BKP8 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
9930021J03RikH3BKP8 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
9930021J03RikH3BKP8 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
9930021J03RikH3BKP8 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
9930021J03RikH3BKP8 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
9930021J03RikH3BKP8 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
9930021J03RikH3BKP8 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.18■□□□□ 0.02
9930021J03RikH3BKP8 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.18■□□□□ 0.02
9930021J03RikH3BKP8 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.18■□□□□ 0.02
9930021J03RikH3BKP8 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
9930021J03RikH3BKP8 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
9930021J03RikH3BKP8 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
9930021J03RikH3BKP8 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.18■□□□□ 0.02
9930021J03RikH3BKP8 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
9930021J03RikH3BKP8 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.18■□□□□ 0.02
9930021J03RikH3BKP8 Haglr-201ENSMUST00000100000 2085 ntBASIC15.18■□□□□ 0.02
9930021J03RikH3BKP8 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.18■□□□□ 0.02
9930021J03RikH3BKP8 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
9930021J03RikH3BKP8 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
9930021J03RikH3BKP8 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
9930021J03RikH3BKP8 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.17■□□□□ 0.02
9930021J03RikH3BKP8 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.17■□□□□ 0.02
9930021J03RikH3BKP8 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
9930021J03RikH3BKP8 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
9930021J03RikH3BKP8 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.17■□□□□ 0.02
9930021J03RikH3BKP8 Gm7461-201ENSMUST00000058918 827 ntBASIC15.17■□□□□ 0.02
9930021J03RikH3BKP8 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
9930021J03RikH3BKP8 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.17■□□□□ 0.02
9930021J03RikH3BKP8 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
9930021J03RikH3BKP8 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
9930021J03RikH3BKP8 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
9930021J03RikH3BKP8 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
9930021J03RikH3BKP8 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
9930021J03RikH3BKP8 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
9930021J03RikH3BKP8 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
9930021J03RikH3BKP8 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
9930021J03RikH3BKP8 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
9930021J03RikH3BKP8 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.17■□□□□ 0.02
9930021J03RikH3BKP8 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
9930021J03RikH3BKP8 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.17■□□□□ 0.02
9930021J03RikH3BKP8 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
9930021J03RikH3BKP8 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
9930021J03RikH3BKP8 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
9930021J03RikH3BKP8 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
9930021J03RikH3BKP8 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
9930021J03RikH3BKP8 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
9930021J03RikH3BKP8 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
9930021J03RikH3BKP8 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
9930021J03RikH3BKP8 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.16■□□□□ 0.02
9930021J03RikH3BKP8 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
9930021J03RikH3BKP8 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.16■□□□□ 0.02
9930021J03RikH3BKP8 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.16■□□□□ 0.02
9930021J03RikH3BKP8 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
9930021J03RikH3BKP8 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
9930021J03RikH3BKP8 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
9930021J03RikH3BKP8 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
9930021J03RikH3BKP8 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
9930021J03RikH3BKP8 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
9930021J03RikH3BKP8 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
9930021J03RikH3BKP8 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
9930021J03RikH3BKP8 Gm27742-201ENSMUST00000184667 60 ntBASIC15.16■□□□□ 0.02
9930021J03RikH3BKP8 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.16■□□□□ 0.02
9930021J03RikH3BKP8 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
9930021J03RikH3BKP8 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
9930021J03RikH3BKP8 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
9930021J03RikH3BKP8 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
9930021J03RikH3BKP8 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.15■□□□□ 0.02
9930021J03RikH3BKP8 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
9930021J03RikH3BKP8 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms