Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdh9F8VPK8 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdh9F8VPK8 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh9F8VPK8 Gm15565-201ENSMUST00000118890 427 ntBASIC16.72■□□□□ 0.27
Pcdh9F8VPK8 Gm2274-201ENSMUST00000184539 609 ntBASIC16.72■□□□□ 0.27
Pcdh9F8VPK8 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Pcdh9F8VPK8 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh9F8VPK8 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh9F8VPK8 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh9F8VPK8 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh9F8VPK8 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh9F8VPK8 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh9F8VPK8 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Pcdh9F8VPK8 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Pcdh9F8VPK8 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh9F8VPK8 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh9F8VPK8 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.71■□□□□ 0.27
Pcdh9F8VPK8 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh9F8VPK8 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh9F8VPK8 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.71■□□□□ 0.27
Pcdh9F8VPK8 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Pcdh9F8VPK8 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.71■□□□□ 0.27
Pcdh9F8VPK8 Gm13559-201ENSMUST00000120476 863 ntBASIC16.71■□□□□ 0.27
Pcdh9F8VPK8 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.71■□□□□ 0.27
Pcdh9F8VPK8 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh9F8VPK8 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh9F8VPK8 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh9F8VPK8 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh9F8VPK8 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh9F8VPK8 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh9F8VPK8 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh9F8VPK8 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh9F8VPK8 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh9F8VPK8 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh9F8VPK8 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh9F8VPK8 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh9F8VPK8 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh9F8VPK8 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh9F8VPK8 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Pcdh9F8VPK8 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Pcdh9F8VPK8 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Pcdh9F8VPK8 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh9F8VPK8 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.7■□□□□ 0.26
Pcdh9F8VPK8 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdh9F8VPK8 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh9F8VPK8 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.7■□□□□ 0.26
Pcdh9F8VPK8 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
Pcdh9F8VPK8 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh9F8VPK8 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh9F8VPK8 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh9F8VPK8 Gm43799-201ENSMUST00000201845 579 ntBASIC16.7■□□□□ 0.26
Pcdh9F8VPK8 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Pcdh9F8VPK8 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh9F8VPK8 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh9F8VPK8 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh9F8VPK8 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh9F8VPK8 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Pcdh9F8VPK8 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdh9F8VPK8 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh9F8VPK8 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh9F8VPK8 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh9F8VPK8 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh9F8VPK8 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh9F8VPK8 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh9F8VPK8 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh9F8VPK8 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh9F8VPK8 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh9F8VPK8 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh9F8VPK8 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.69■□□□□ 0.26
Pcdh9F8VPK8 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh9F8VPK8 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh9F8VPK8 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.69■□□□□ 0.26
Pcdh9F8VPK8 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.69■□□□□ 0.26
Pcdh9F8VPK8 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh9F8VPK8 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Pcdh9F8VPK8 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.69■□□□□ 0.26
Pcdh9F8VPK8 Gm29707-201ENSMUST00000196325 491 ntBASIC16.69■□□□□ 0.26
Pcdh9F8VPK8 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh9F8VPK8 Gm7213-201ENSMUST00000215977 950 ntBASIC16.69■□□□□ 0.26
Pcdh9F8VPK8 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.69■□□□□ 0.26
Pcdh9F8VPK8 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh9F8VPK8 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh9F8VPK8 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh9F8VPK8 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh9F8VPK8 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh9F8VPK8 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh9F8VPK8 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh9F8VPK8 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh9F8VPK8 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh9F8VPK8 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh9F8VPK8 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh9F8VPK8 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.68■□□□□ 0.26
Pcdh9F8VPK8 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh9F8VPK8 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh9F8VPK8 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh9F8VPK8 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh9F8VPK8 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Pcdh9F8VPK8 Gm11336-201ENSMUST00000118168 334 ntBASIC16.68■□□□□ 0.26
Pcdh9F8VPK8 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.68■□□□□ 0.26
Pcdh9F8VPK8 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms