Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Ccdc188F6WEU2 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc188F6WEU2 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc188F6WEU2 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc188F6WEU2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc188F6WEU2 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc188F6WEU2 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc188F6WEU2 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc188F6WEU2 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Ccdc188F6WEU2 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc188F6WEU2 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC16.43■□□□□ 0.22
Ccdc188F6WEU2 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC16.43■□□□□ 0.22
Ccdc188F6WEU2 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.43■□□□□ 0.22
Ccdc188F6WEU2 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc188F6WEU2 Gm27989-201ENSMUST00000184721 107 ntBASIC16.43■□□□□ 0.22
Ccdc188F6WEU2 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.43■□□□□ 0.22
Ccdc188F6WEU2 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc188F6WEU2 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.43■□□□□ 0.22
Ccdc188F6WEU2 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.43■□□□□ 0.22
Ccdc188F6WEU2 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Ccdc188F6WEU2 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc188F6WEU2 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc188F6WEU2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.43■□□□□ 0.22
Ccdc188F6WEU2 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Ccdc188F6WEU2 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc188F6WEU2 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc188F6WEU2 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Ccdc188F6WEU2 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc188F6WEU2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc188F6WEU2 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc188F6WEU2 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc188F6WEU2 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc188F6WEU2 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc188F6WEU2 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc188F6WEU2 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc188F6WEU2 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc188F6WEU2 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ccdc188F6WEU2 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ccdc188F6WEU2 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc188F6WEU2 Mir7085-201ENSMUST00000184353 66 ntBASIC16.42■□□□□ 0.22
Ccdc188F6WEU2 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.42■□□□□ 0.22
Ccdc188F6WEU2 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.42■□□□□ 0.22
Ccdc188F6WEU2 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.42■□□□□ 0.22
Ccdc188F6WEU2 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc188F6WEU2 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.42■□□□□ 0.22
Ccdc188F6WEU2 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc188F6WEU2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc188F6WEU2 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.42■□□□□ 0.22
Ccdc188F6WEU2 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc188F6WEU2 Gm6018-201ENSMUST00000216090 1306 ntBASIC16.42■□□□□ 0.22
Ccdc188F6WEU2 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc188F6WEU2 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc188F6WEU2 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc188F6WEU2 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc188F6WEU2 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.41■□□□□ 0.22
Ccdc188F6WEU2 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Ccdc188F6WEU2 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc188F6WEU2 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc188F6WEU2 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc188F6WEU2 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc188F6WEU2 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.41■□□□□ 0.22
Ccdc188F6WEU2 Gm24158-201ENSMUST00000175263 71 ntBASIC16.41■□□□□ 0.22
Ccdc188F6WEU2 Gm38319-201ENSMUST00000194537 1266 ntBASIC16.41■□□□□ 0.22
Ccdc188F6WEU2 AC135669.1-201ENSMUST00000213585 412 ntBASIC16.41■□□□□ 0.22
Ccdc188F6WEU2 Gm7787-201ENSMUST00000216858 688 ntBASIC16.41■□□□□ 0.22
Ccdc188F6WEU2 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC16.41■□□□□ 0.22
Ccdc188F6WEU2 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc188F6WEU2 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc188F6WEU2 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Ccdc188F6WEU2 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc188F6WEU2 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc188F6WEU2 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc188F6WEU2 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc188F6WEU2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc188F6WEU2 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc188F6WEU2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc188F6WEU2 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ccdc188F6WEU2 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc188F6WEU2 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc188F6WEU2 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc188F6WEU2 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.4■□□□□ 0.22
Ccdc188F6WEU2 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc188F6WEU2 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc188F6WEU2 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc188F6WEU2 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC16.4■□□□□ 0.22
Ccdc188F6WEU2 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc188F6WEU2 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc188F6WEU2 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC16.4■□□□□ 0.22
Ccdc188F6WEU2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.4■□□□□ 0.22
Ccdc188F6WEU2 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc188F6WEU2 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc188F6WEU2 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc188F6WEU2 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc188F6WEU2 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.4■□□□□ 0.22
Ccdc188F6WEU2 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc188F6WEU2 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ccdc188F6WEU2 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.39■□□□□ 0.21
Ccdc188F6WEU2 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.39■□□□□ 0.21
Ccdc188F6WEU2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Ccdc188F6WEU2 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms