Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.27■□□□□ 0.36
Rfx8D3YU81 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx8D3YU81 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx8D3YU81 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx8D3YU81 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx8D3YU81 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Rfx8D3YU81 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx8D3YU81 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfx8D3YU81 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Rfx8D3YU81 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rfx8D3YU81 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
Rfx8D3YU81 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rfx8D3YU81 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.27■□□□□ 0.35
Rfx8D3YU81 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.26■□□□□ 0.35
Rfx8D3YU81 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx8D3YU81 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx8D3YU81 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx8D3YU81 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx8D3YU81 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx8D3YU81 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx8D3YU81 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx8D3YU81 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx8D3YU81 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rfx8D3YU81 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx8D3YU81 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx8D3YU81 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx8D3YU81 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx8D3YU81 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rfx8D3YU81 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx8D3YU81 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx8D3YU81 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx8D3YU81 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx8D3YU81 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx8D3YU81 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx8D3YU81 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.26■□□□□ 0.35
Rfx8D3YU81 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfx8D3YU81 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Rfx8D3YU81 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx8D3YU81 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Rfx8D3YU81 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.25■□□□□ 0.35
Rfx8D3YU81 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Rfx8D3YU81 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx8D3YU81 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx8D3YU81 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Rfx8D3YU81 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx8D3YU81 Gm11950-201ENSMUST00000121615 838 ntBASIC17.25■□□□□ 0.35
Rfx8D3YU81 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Rfx8D3YU81 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.25■□□□□ 0.35
Rfx8D3YU81 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx8D3YU81 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx8D3YU81 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Rfx8D3YU81 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx8D3YU81 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx8D3YU81 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx8D3YU81 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.25■□□□□ 0.35
Rfx8D3YU81 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx8D3YU81 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx8D3YU81 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Rfx8D3YU81 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx8D3YU81 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx8D3YU81 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Rfx8D3YU81 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx8D3YU81 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx8D3YU81 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfx8D3YU81 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx8D3YU81 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx8D3YU81 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx8D3YU81 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx8D3YU81 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx8D3YU81 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx8D3YU81 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx8D3YU81 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Rfx8D3YU81 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx8D3YU81 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Rfx8D3YU81 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx8D3YU81 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx8D3YU81 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Rfx8D3YU81 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx8D3YU81 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
Rfx8D3YU81 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Rfx8D3YU81 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx8D3YU81 Gm6345-202ENSMUST00000180900 204 ntBASIC17.24■□□□□ 0.35
Rfx8D3YU81 Gm29518-201ENSMUST00000190858 372 ntBASIC17.24■□□□□ 0.35
Rfx8D3YU81 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.24■□□□□ 0.35
Rfx8D3YU81 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx8D3YU81 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx8D3YU81 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx8D3YU81 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx8D3YU81 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Rfx8D3YU81 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx8D3YU81 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx8D3YU81 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx8D3YU81 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Rfx8D3YU81 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Rfx8D3YU81 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx8D3YU81 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx8D3YU81 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx8D3YU81 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx8D3YU81 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx8D3YU81 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms