Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Syce3B5KM66 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC18.72■□□□□ 0.59
Syce3B5KM66 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC18.72■□□□□ 0.59
Syce3B5KM66 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Syce3B5KM66 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Syce3B5KM66 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Syce3B5KM66 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Syce3B5KM66 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Syce3B5KM66 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Syce3B5KM66 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Syce3B5KM66 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Syce3B5KM66 Gm15039-201ENSMUST00000118914 875 ntBASIC18.72■□□□□ 0.59
Syce3B5KM66 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.72■□□□□ 0.59
Syce3B5KM66 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Syce3B5KM66 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Syce3B5KM66 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.72■□□□□ 0.59
Syce3B5KM66 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Syce3B5KM66 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Syce3B5KM66 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Syce3B5KM66 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Syce3B5KM66 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Syce3B5KM66 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Syce3B5KM66 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Syce3B5KM66 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.71■□□□□ 0.59
Syce3B5KM66 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.71■□□□□ 0.59
Syce3B5KM66 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Syce3B5KM66 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Syce3B5KM66 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Syce3B5KM66 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Syce3B5KM66 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Syce3B5KM66 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Syce3B5KM66 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Syce3B5KM66 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Syce3B5KM66 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Syce3B5KM66 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Syce3B5KM66 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.7■□□□□ 0.58
Syce3B5KM66 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Syce3B5KM66 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.7■□□□□ 0.58
Syce3B5KM66 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.7■□□□□ 0.58
Syce3B5KM66 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Syce3B5KM66 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.7■□□□□ 0.58
Syce3B5KM66 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Syce3B5KM66 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Syce3B5KM66 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Syce3B5KM66 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Syce3B5KM66 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Syce3B5KM66 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Syce3B5KM66 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Syce3B5KM66 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Syce3B5KM66 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Syce3B5KM66 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Syce3B5KM66 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Syce3B5KM66 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
Syce3B5KM66 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Syce3B5KM66 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Syce3B5KM66 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Syce3B5KM66 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Syce3B5KM66 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Syce3B5KM66 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Syce3B5KM66 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Syce3B5KM66 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Syce3B5KM66 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Syce3B5KM66 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Syce3B5KM66 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Syce3B5KM66 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.69■□□□□ 0.58
Syce3B5KM66 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Syce3B5KM66 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Syce3B5KM66 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Syce3B5KM66 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Syce3B5KM66 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Syce3B5KM66 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Syce3B5KM66 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.69■□□□□ 0.58
Syce3B5KM66 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Syce3B5KM66 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Syce3B5KM66 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Syce3B5KM66 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Syce3B5KM66 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.68■□□□□ 0.58
Syce3B5KM66 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Syce3B5KM66 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Syce3B5KM66 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.68■□□□□ 0.58
Syce3B5KM66 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Syce3B5KM66 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Syce3B5KM66 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Syce3B5KM66 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Syce3B5KM66 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC18.68■□□□□ 0.58
Syce3B5KM66 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Syce3B5KM66 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Syce3B5KM66 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Syce3B5KM66 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Syce3B5KM66 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Syce3B5KM66 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Syce3B5KM66 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Syce3B5KM66 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Syce3B5KM66 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Syce3B5KM66 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Syce3B5KM66 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.68■□□□□ 0.58
Syce3B5KM66 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syce3B5KM66 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syce3B5KM66 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Syce3B5KM66 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms