Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Gm24270-201ENSMUST00000102326 57 ntBASIC18.83■□□□□ 0.6
Clrn2B2RVW2 Gm7222-201ENSMUST00000117512 906 ntBASIC18.83■□□□□ 0.6
Clrn2B2RVW2 Gm14822-201ENSMUST00000122247 291 ntBASIC18.83■□□□□ 0.6
Clrn2B2RVW2 Gm24245-201ENSMUST00000157318 57 ntBASIC18.83■□□□□ 0.6
Clrn2B2RVW2 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
Clrn2B2RVW2 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Clrn2B2RVW2 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Clrn2B2RVW2 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.83■□□□□ 0.6
Clrn2B2RVW2 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Clrn2B2RVW2 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clrn2B2RVW2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clrn2B2RVW2 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clrn2B2RVW2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clrn2B2RVW2 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clrn2B2RVW2 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clrn2B2RVW2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.82■□□□□ 0.6
Clrn2B2RVW2 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clrn2B2RVW2 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clrn2B2RVW2 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Clrn2B2RVW2 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clrn2B2RVW2 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Clrn2B2RVW2 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC18.82■□□□□ 0.6
Clrn2B2RVW2 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.82■□□□□ 0.6
Clrn2B2RVW2 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.82■□□□□ 0.6
Clrn2B2RVW2 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC18.82■□□□□ 0.6
Clrn2B2RVW2 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC18.82■□□□□ 0.6
Clrn2B2RVW2 AC225888.1-201ENSMUST00000227184 728 ntBASIC18.82■□□□□ 0.6
Clrn2B2RVW2 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Clrn2B2RVW2 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC18.82■□□□□ 0.6
Clrn2B2RVW2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clrn2B2RVW2 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clrn2B2RVW2 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clrn2B2RVW2 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clrn2B2RVW2 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.81■□□□□ 0.6
Clrn2B2RVW2 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clrn2B2RVW2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.81■□□□□ 0.6
Clrn2B2RVW2 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clrn2B2RVW2 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clrn2B2RVW2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clrn2B2RVW2 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clrn2B2RVW2 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Clrn2B2RVW2 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.81■□□□□ 0.6
Clrn2B2RVW2 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.81■□□□□ 0.6
Clrn2B2RVW2 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.81■□□□□ 0.6
Clrn2B2RVW2 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clrn2B2RVW2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.81■□□□□ 0.6
Clrn2B2RVW2 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clrn2B2RVW2 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clrn2B2RVW2 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clrn2B2RVW2 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Clrn2B2RVW2 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Clrn2B2RVW2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Clrn2B2RVW2 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clrn2B2RVW2 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clrn2B2RVW2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clrn2B2RVW2 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.8■□□□□ 0.6
Clrn2B2RVW2 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.8■□□□□ 0.6
Clrn2B2RVW2 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clrn2B2RVW2 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clrn2B2RVW2 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clrn2B2RVW2 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.8■□□□□ 0.6
Clrn2B2RVW2 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clrn2B2RVW2 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.8■□□□□ 0.6
Clrn2B2RVW2 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Clrn2B2RVW2 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clrn2B2RVW2 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Clrn2B2RVW2 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clrn2B2RVW2 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clrn2B2RVW2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clrn2B2RVW2 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clrn2B2RVW2 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clrn2B2RVW2 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clrn2B2RVW2 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Clrn2B2RVW2 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clrn2B2RVW2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clrn2B2RVW2 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clrn2B2RVW2 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Clrn2B2RVW2 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Clrn2B2RVW2 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clrn2B2RVW2 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Clrn2B2RVW2 Rarb-207ENSMUST00000225921 2756 ntBASIC18.79■□□□□ 0.6
Clrn2B2RVW2 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Clrn2B2RVW2 Gm27397-201ENSMUST00000184997 107 ntBASIC18.79■□□□□ 0.6
Clrn2B2RVW2 AC159106.1-201ENSMUST00000224421 690 ntBASIC18.79■□□□□ 0.6
Clrn2B2RVW2 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clrn2B2RVW2 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC18.79■□□□□ 0.6
Clrn2B2RVW2 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Clrn2B2RVW2 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clrn2B2RVW2 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clrn2B2RVW2 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clrn2B2RVW2 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
Clrn2B2RVW2 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.79■□□□□ 0.6
Clrn2B2RVW2 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clrn2B2RVW2 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Clrn2B2RVW2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Clrn2B2RVW2 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clrn2B2RVW2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.78■□□□□ 0.6
Clrn2B2RVW2 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clrn2B2RVW2 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clrn2B2RVW2 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms