Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a4A2AX52 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a4A2AX52 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a4A2AX52 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a4A2AX52 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a4A2AX52 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Col6a4A2AX52 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Col6a4A2AX52 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.7□□□□□ -0.22
Col6a4A2AX52 Gm11025-201ENSMUST00000140773 466 ntBASIC13.7□□□□□ -0.22
Col6a4A2AX52 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.7□□□□□ -0.22
Col6a4A2AX52 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a4A2AX52 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a4A2AX52 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.7□□□□□ -0.22
Col6a4A2AX52 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.7□□□□□ -0.22
Col6a4A2AX52 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.7□□□□□ -0.22
Col6a4A2AX52 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.7□□□□□ -0.22
Col6a4A2AX52 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.7□□□□□ -0.22
Col6a4A2AX52 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a4A2AX52 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col6a4A2AX52 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a4A2AX52 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Col6a4A2AX52 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a4A2AX52 Gm8097-201ENSMUST00000117903 829 ntBASIC13.69□□□□□ -0.22
Col6a4A2AX52 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.69□□□□□ -0.22
Col6a4A2AX52 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a4A2AX52 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Col6a4A2AX52 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a4A2AX52 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a4A2AX52 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.69□□□□□ -0.22
Col6a4A2AX52 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a4A2AX52 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.69□□□□□ -0.22
Col6a4A2AX52 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a4A2AX52 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Col6a4A2AX52 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a4A2AX52 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a4A2AX52 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a4A2AX52 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a4A2AX52 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Col6a4A2AX52 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a4A2AX52 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.68□□□□□ -0.22
Col6a4A2AX52 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Col6a4A2AX52 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a4A2AX52 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a4A2AX52 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a4A2AX52 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Col6a4A2AX52 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC13.68□□□□□ -0.22
Col6a4A2AX52 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a4A2AX52 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a4A2AX52 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.68□□□□□ -0.22
Col6a4A2AX52 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a4A2AX52 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Col6a4A2AX52 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a4A2AX52 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Col6a4A2AX52 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.68□□□□□ -0.22
Col6a4A2AX52 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a4A2AX52 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a4A2AX52 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.68□□□□□ -0.22
Col6a4A2AX52 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a4A2AX52 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a4A2AX52 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Col6a4A2AX52 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a4A2AX52 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a4A2AX52 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Col6a4A2AX52 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a4A2AX52 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a4A2AX52 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.67□□□□□ -0.22
Col6a4A2AX52 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a4A2AX52 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Col6a4A2AX52 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a4A2AX52 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a4A2AX52 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.67□□□□□ -0.22
Col6a4A2AX52 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a4A2AX52 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a4A2AX52 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a4A2AX52 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a4A2AX52 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a4A2AX52 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.67□□□□□ -0.22
Col6a4A2AX52 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.67□□□□□ -0.22
Col6a4A2AX52 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.67□□□□□ -0.22
Col6a4A2AX52 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a4A2AX52 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.67□□□□□ -0.22
Col6a4A2AX52 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Col6a4A2AX52 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13.67□□□□□ -0.22
Col6a4A2AX52 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a4A2AX52 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a4A2AX52 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Col6a4A2AX52 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a4A2AX52 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a4A2AX52 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a4A2AX52 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC13.66□□□□□ -0.22
Col6a4A2AX52 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a4A2AX52 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Col6a4A2AX52 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a4A2AX52 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.66□□□□□ -0.22
Col6a4A2AX52 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a4A2AX52 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Col6a4A2AX52 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a4A2AX52 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a4A2AX52 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a4A2AX52 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms