Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12d-1A0N8R0 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12d-1A0N8R0 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav12d-1A0N8R0 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.13□□□□□ -0.31
Trav12d-1A0N8R0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12d-1A0N8R0 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12d-1A0N8R0 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12d-1A0N8R0 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12d-1A0N8R0 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12d-1A0N8R0 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12d-1A0N8R0 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12d-1A0N8R0 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.13□□□□□ -0.31
Trav12d-1A0N8R0 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.13□□□□□ -0.31
Trav12d-1A0N8R0 Timm23-208ENSMUST00000226683 750 ntBASIC13.13□□□□□ -0.31
Trav12d-1A0N8R0 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12d-1A0N8R0 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trav12d-1A0N8R0 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12d-1A0N8R0 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Trav12d-1A0N8R0 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12d-1A0N8R0 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12d-1A0N8R0 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12d-1A0N8R0 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12d-1A0N8R0 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12d-1A0N8R0 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12d-1A0N8R0 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12d-1A0N8R0 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav12d-1A0N8R0 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav12d-1A0N8R0 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-1A0N8R0 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-1A0N8R0 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-1A0N8R0 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-1A0N8R0 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-1A0N8R0 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-1A0N8R0 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav12d-1A0N8R0 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-1A0N8R0 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav12d-1A0N8R0 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav12d-1A0N8R0 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-1A0N8R0 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Trav12d-1A0N8R0 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-1A0N8R0 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-1A0N8R0 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-1A0N8R0 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-1A0N8R0 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-1A0N8R0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC13.12□□□□□ -0.31
Trav12d-1A0N8R0 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav12d-1A0N8R0 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Trav12d-1A0N8R0 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-1A0N8R0 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav12d-1A0N8R0 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-1A0N8R0 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-1A0N8R0 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav12d-1A0N8R0 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Trav12d-1A0N8R0 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-1A0N8R0 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-1A0N8R0 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav12d-1A0N8R0 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-1A0N8R0 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Trav12d-1A0N8R0 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav12d-1A0N8R0 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12d-1A0N8R0 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trav12d-1A0N8R0 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12d-1A0N8R0 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12d-1A0N8R0 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12d-1A0N8R0 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12d-1A0N8R0 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12d-1A0N8R0 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12d-1A0N8R0 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12d-1A0N8R0 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trav12d-1A0N8R0 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.11□□□□□ -0.31
Trav12d-1A0N8R0 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12d-1A0N8R0 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12d-1A0N8R0 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12d-1A0N8R0 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.11□□□□□ -0.31
Trav12d-1A0N8R0 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC13.11□□□□□ -0.31
Trav12d-1A0N8R0 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav12d-1A0N8R0 Gm18115-201ENSMUST00000221209 621 ntBASIC13.11□□□□□ -0.31
Trav12d-1A0N8R0 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12d-1A0N8R0 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12d-1A0N8R0 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav12d-1A0N8R0 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12d-1A0N8R0 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12d-1A0N8R0 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12d-1A0N8R0 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12d-1A0N8R0 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12d-1A0N8R0 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav12d-1A0N8R0 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12d-1A0N8R0 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12d-1A0N8R0 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC13.11□□□□□ -0.31
Trav12d-1A0N8R0 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Trav12d-1A0N8R0 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12d-1A0N8R0 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12d-1A0N8R0 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12d-1A0N8R0 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Trav12d-1A0N8R0 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav12d-1A0N8R0 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12d-1A0N8R0 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12d-1A0N8R0 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12d-1A0N8R0 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12d-1A0N8R0 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms