Protein–RNA interactions for Protein: A0N8N6

Trav12-2, T cell receptor alpha variable 12-2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-2A0N8N6 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-2A0N8N6 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-2A0N8N6 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-2A0N8N6 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-2A0N8N6 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-2A0N8N6 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-2A0N8N6 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.35□□□□□ -0.11
Trav12-2A0N8N6 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-2A0N8N6 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Trav12-2A0N8N6 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav12-2A0N8N6 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.35□□□□□ -0.11
Trav12-2A0N8N6 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.35□□□□□ -0.11
Trav12-2A0N8N6 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-2A0N8N6 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-2A0N8N6 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-2A0N8N6 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav12-2A0N8N6 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-2A0N8N6 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-2A0N8N6 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12-2A0N8N6 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Trav12-2A0N8N6 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12-2A0N8N6 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trav12-2A0N8N6 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Trav12-2A0N8N6 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12-2A0N8N6 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12-2A0N8N6 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav12-2A0N8N6 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12-2A0N8N6 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12-2A0N8N6 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12-2A0N8N6 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.34□□□□□ -0.11
Trav12-2A0N8N6 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.34□□□□□ -0.11
Trav12-2A0N8N6 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.34□□□□□ -0.11
Trav12-2A0N8N6 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12-2A0N8N6 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Trav12-2A0N8N6 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Trav12-2A0N8N6 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Trav12-2A0N8N6 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12-2A0N8N6 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12-2A0N8N6 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12-2A0N8N6 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav12-2A0N8N6 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12-2A0N8N6 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12-2A0N8N6 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12-2A0N8N6 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav12-2A0N8N6 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav12-2A0N8N6 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav12-2A0N8N6 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trav12-2A0N8N6 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav12-2A0N8N6 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trav12-2A0N8N6 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav12-2A0N8N6 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav12-2A0N8N6 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav12-2A0N8N6 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav12-2A0N8N6 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav12-2A0N8N6 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav12-2A0N8N6 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Trav12-2A0N8N6 Gm15565-201ENSMUST00000118890 427 ntBASIC14.33□□□□□ -0.12
Trav12-2A0N8N6 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.33□□□□□ -0.12
Trav12-2A0N8N6 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav12-2A0N8N6 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.33□□□□□ -0.12
Trav12-2A0N8N6 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav12-2A0N8N6 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav12-2A0N8N6 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav12-2A0N8N6 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav12-2A0N8N6 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trav12-2A0N8N6 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav12-2A0N8N6 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav12-2A0N8N6 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav12-2A0N8N6 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav12-2A0N8N6 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav12-2A0N8N6 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav12-2A0N8N6 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav12-2A0N8N6 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.33□□□□□ -0.12
Trav12-2A0N8N6 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav12-2A0N8N6 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav12-2A0N8N6 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav12-2A0N8N6 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Trav12-2A0N8N6 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav12-2A0N8N6 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12-2A0N8N6 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12-2A0N8N6 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12-2A0N8N6 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12-2A0N8N6 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12-2A0N8N6 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12-2A0N8N6 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12-2A0N8N6 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12-2A0N8N6 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12-2A0N8N6 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trav12-2A0N8N6 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12-2A0N8N6 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12-2A0N8N6 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Trav12-2A0N8N6 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trav12-2A0N8N6 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav12-2A0N8N6 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Trav12-2A0N8N6 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav12-2A0N8N6 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12-2A0N8N6 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12-2A0N8N6 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12-2A0N8N6 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12-2A0N8N6 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms