Protein–RNA interactions for Protein: A0A140T8M3

Igkv8-30, Immunoglobulin kappa chain variable 8-30 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-30A0A140T8M3 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-30A0A140T8M3 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-30A0A140T8M3 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-30A0A140T8M3 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-30A0A140T8M3 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-30A0A140T8M3 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-30A0A140T8M3 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC10.38□□□□□ -0.75
Igkv8-30A0A140T8M3 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-30A0A140T8M3 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Sybu-209ENSMUST00000228639 4113 ntBASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Igkv8-30A0A140T8M3 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-30A0A140T8M3 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-30A0A140T8M3 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-30A0A140T8M3 Gm10129-202ENSMUST00000193100 1316 ntBASIC10.36□□□□□ -0.75
Igkv8-30A0A140T8M3 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-30A0A140T8M3 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-30A0A140T8M3 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC10.36□□□□□ -0.75
Igkv8-30A0A140T8M3 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-30A0A140T8M3 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-30A0A140T8M3 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Igkv8-30A0A140T8M3 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-30A0A140T8M3 Gm29340-201ENSMUST00000188763 3854 ntBASIC10.36□□□□□ -0.75
Igkv8-30A0A140T8M3 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-30A0A140T8M3 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-30A0A140T8M3 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-30A0A140T8M3 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-30A0A140T8M3 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC10.36□□□□□ -0.75
Igkv8-30A0A140T8M3 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Igkv8-30A0A140T8M3 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Igkv8-30A0A140T8M3 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
Igkv8-30A0A140T8M3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-30A0A140T8M3 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-30A0A140T8M3 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Igkv8-30A0A140T8M3 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-30A0A140T8M3 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-30A0A140T8M3 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-30A0A140T8M3 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Igkv8-30A0A140T8M3 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-30A0A140T8M3 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC10.36□□□□□ -0.75
Igkv8-30A0A140T8M3 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-30A0A140T8M3 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-30A0A140T8M3 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Igkv8-30A0A140T8M3 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-30A0A140T8M3 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-30A0A140T8M3 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-30A0A140T8M3 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-30A0A140T8M3 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Igkv8-30A0A140T8M3 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Igkv8-30A0A140T8M3 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-30A0A140T8M3 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-30A0A140T8M3 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Igkv8-30A0A140T8M3 AL590614.2-201ENSMUST00000225374 1937 ntBASIC10.35□□□□□ -0.75
Igkv8-30A0A140T8M3 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms