Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Ccdc194A0A140LIT1 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
Ccdc194A0A140LIT1 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc194A0A140LIT1 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc194A0A140LIT1 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc194A0A140LIT1 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc194A0A140LIT1 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc194A0A140LIT1 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc194A0A140LIT1 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.23■□□□□ 0.19
Ccdc194A0A140LIT1 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.23■□□□□ 0.19
Ccdc194A0A140LIT1 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc194A0A140LIT1 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc194A0A140LIT1 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc194A0A140LIT1 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Ccdc194A0A140LIT1 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc194A0A140LIT1 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Ccdc194A0A140LIT1 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Ccdc194A0A140LIT1 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc194A0A140LIT1 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc194A0A140LIT1 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Ccdc194A0A140LIT1 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc194A0A140LIT1 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc194A0A140LIT1 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc194A0A140LIT1 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Ccdc194A0A140LIT1 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc194A0A140LIT1 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc194A0A140LIT1 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc194A0A140LIT1 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc194A0A140LIT1 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc194A0A140LIT1 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc194A0A140LIT1 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Ccdc194A0A140LIT1 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc194A0A140LIT1 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc194A0A140LIT1 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ccdc194A0A140LIT1 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc194A0A140LIT1 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.22■□□□□ 0.19
Ccdc194A0A140LIT1 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.22■□□□□ 0.19
Ccdc194A0A140LIT1 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc194A0A140LIT1 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ccdc194A0A140LIT1 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc194A0A140LIT1 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc194A0A140LIT1 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc194A0A140LIT1 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc194A0A140LIT1 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc194A0A140LIT1 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc194A0A140LIT1 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc194A0A140LIT1 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc194A0A140LIT1 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc194A0A140LIT1 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc194A0A140LIT1 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc194A0A140LIT1 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc194A0A140LIT1 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.21■□□□□ 0.19
Ccdc194A0A140LIT1 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc194A0A140LIT1 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.21■□□□□ 0.19
Ccdc194A0A140LIT1 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.21■□□□□ 0.19
Ccdc194A0A140LIT1 Gm7370-201ENSMUST00000219471 767 ntBASIC16.21■□□□□ 0.19
Ccdc194A0A140LIT1 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc194A0A140LIT1 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Ccdc194A0A140LIT1 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc194A0A140LIT1 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc194A0A140LIT1 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ccdc194A0A140LIT1 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc194A0A140LIT1 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc194A0A140LIT1 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.21■□□□□ 0.18
Ccdc194A0A140LIT1 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ccdc194A0A140LIT1 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ccdc194A0A140LIT1 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ccdc194A0A140LIT1 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.21■□□□□ 0.18
Ccdc194A0A140LIT1 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ccdc194A0A140LIT1 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ccdc194A0A140LIT1 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc194A0A140LIT1 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc194A0A140LIT1 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc194A0A140LIT1 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc194A0A140LIT1 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc194A0A140LIT1 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc194A0A140LIT1 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc194A0A140LIT1 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc194A0A140LIT1 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc194A0A140LIT1 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc194A0A140LIT1 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc194A0A140LIT1 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.2■□□□□ 0.18
Ccdc194A0A140LIT1 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc194A0A140LIT1 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.2■□□□□ 0.18
Ccdc194A0A140LIT1 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Ccdc194A0A140LIT1 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc194A0A140LIT1 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc194A0A140LIT1 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc194A0A140LIT1 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc194A0A140LIT1 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc194A0A140LIT1 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc194A0A140LIT1 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.2■□□□□ 0.18
Ccdc194A0A140LIT1 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc194A0A140LIT1 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc194A0A140LIT1 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc194A0A140LIT1 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc194A0A140LIT1 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc194A0A140LIT1 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.19■□□□□ 0.18
Ccdc194A0A140LIT1 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc194A0A140LIT1 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms