Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.29□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm29707-201ENSMUST00000196325 491 ntBASIC14.29□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm7213-201ENSMUST00000215977 950 ntBASIC14.29□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10566-201ENSMUST00000086739 996 ntBASIC14.29□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm27011-201ENSMUST00000182352 972 ntBASIC14.28□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.28□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.27□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.27□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Trav15d-2-dv6d-2A0A0G2JGQ7 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.27□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.27□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.27□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms