Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Gm26571-201ENSMUST00000181399 666 ntBASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Rab3c-203ENSMUST00000224180 967 ntBASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Gm43072-201ENSMUST00000200283 1671 ntBASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9d-4A0A0G2JG37 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav9d-4A0A0G2JG37 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav9d-4A0A0G2JG37 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Trav9d-4A0A0G2JG37 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trav9d-4A0A0G2JG37 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav9d-4A0A0G2JG37 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav9d-4A0A0G2JG37 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav9d-4A0A0G2JG37 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC11.19□□□□□ -0.62
Trav9d-4A0A0G2JG37 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav9d-4A0A0G2JG37 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trav9d-4A0A0G2JG37 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav9d-4A0A0G2JG37 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav9d-4A0A0G2JG37 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav9d-4A0A0G2JG37 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC11.19□□□□□ -0.62
Trav9d-4A0A0G2JG37 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav9d-4A0A0G2JG37 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav9d-4A0A0G2JG37 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trav9d-4A0A0G2JG37 Gm27405-201ENSMUST00000184201 112 ntBASIC11.19□□□□□ -0.62
Trav9d-4A0A0G2JG37 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC11.19□□□□□ -0.62
Trav9d-4A0A0G2JG37 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Trav9d-4A0A0G2JG37 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Trav9d-4A0A0G2JG37 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
Trav9d-4A0A0G2JG37 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav9d-4A0A0G2JG37 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav9d-4A0A0G2JG37 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav9d-4A0A0G2JG37 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC11.19□□□□□ -0.62
Trav9d-4A0A0G2JG37 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC11.19□□□□□ -0.62
Trav9d-4A0A0G2JG37 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trav9d-4A0A0G2JG37 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav9d-4A0A0G2JG37 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav9d-4A0A0G2JG37 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trav9d-4A0A0G2JG37 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav9d-4A0A0G2JG37 AL590614.2-201ENSMUST00000225374 1937 ntBASIC11.19□□□□□ -0.62
Trav9d-4A0A0G2JG37 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav9d-4A0A0G2JG37 Prob1-201ENSMUST00000097619 3021 ntBASIC11.19□□□□□ -0.62
Trav9d-4A0A0G2JG37 Gm9867-201ENSMUST00000192212 2647 ntBASIC11.19□□□□□ -0.62
Trav9d-4A0A0G2JG37 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav9d-4A0A0G2JG37 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav9d-4A0A0G2JG37 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav9d-4A0A0G2JG37 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav9d-4A0A0G2JG37 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Trav9d-4A0A0G2JG37 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav9d-4A0A0G2JG37 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav9d-4A0A0G2JG37 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav9d-4A0A0G2JG37 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav9d-4A0A0G2JG37 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav9d-4A0A0G2JG37 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC11.18□□□□□ -0.62
Trav9d-4A0A0G2JG37 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav9d-4A0A0G2JG37 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trav9d-4A0A0G2JG37 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trav9d-4A0A0G2JG37 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav9d-4A0A0G2JG37 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav9d-4A0A0G2JG37 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav9d-4A0A0G2JG37 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Trav9d-4A0A0G2JG37 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav9d-4A0A0G2JG37 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC11.18□□□□□ -0.62
Trav9d-4A0A0G2JG37 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trav9d-4A0A0G2JG37 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC11.18□□□□□ -0.62
Trav9d-4A0A0G2JG37 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav9d-4A0A0G2JG37 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav9d-4A0A0G2JG37 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav9d-4A0A0G2JG37 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms