Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Gm44878-201ENSMUST00000205812 1295 ntBASIC11.25□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Gm9731-201ENSMUST00000209480 747 ntBASIC11.25□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Gm7638-201ENSMUST00000121348 967 ntBASIC11.24□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Gm15378-201ENSMUST00000121894 207 ntBASIC11.24□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC11.24□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13d-4A0A0G2JFX3 AC135637.1-201ENSMUST00000227750 365 ntBASIC11.24□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Trav13d-4A0A0G2JFX3 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC11.24□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC11.23□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13d-4A0A0G2JFX3 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trav13d-4A0A0G2JFX3 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13d-4A0A0G2JFX3 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC11.23□□□□□ -0.61
Trav13d-4A0A0G2JFX3 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC11.23□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13d-4A0A0G2JFX3 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms