Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.81■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Atg4a-psA0A0G2JFS9 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.81■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC19.8■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.8■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.8■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC19.8■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.8■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Atg4a-psA0A0G2JFS9 AC069562.2-201ENSMUST00000224644 2146 ntBASIC19.8■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC19.8■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.79■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.79■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.78■□□□□ 0.76
Atg4a-psA0A0G2JFS9 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.78■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Gm19430-201ENSMUST00000193847 2137 ntBASIC19.78■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Atg4a-psA0A0G2JFS9 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.77■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Gm27742-201ENSMUST00000184667 60 ntBASIC19.77■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Atg4a-psA0A0G2JFS9 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC19.77■□□□□ 0.75
Atg4a-psA0A0G2JFS9 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Atg4a-psA0A0G2JFS9 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Atg4a-psA0A0G2JFS9 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Atg4a-psA0A0G2JFS9 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Atg4a-psA0A0G2JFS9 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Atg4a-psA0A0G2JFS9 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Atg4a-psA0A0G2JFS9 Dancr-204ENSMUST00000132389 2347 ntBASIC19.76■□□□□ 0.75
Atg4a-psA0A0G2JFS9 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Atg4a-psA0A0G2JFS9 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Atg4a-psA0A0G2JFS9 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC19.76■□□□□ 0.75
Atg4a-psA0A0G2JFS9 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Atg4a-psA0A0G2JFS9 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Atg4a-psA0A0G2JFS9 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Atg4a-psA0A0G2JFS9 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Atg4a-psA0A0G2JFS9 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms