Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Igkv8-28A0A0G2JE47 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Igkv8-28A0A0G2JE47 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Igkv8-28A0A0G2JE47 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Igkv8-28A0A0G2JE47 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Igkv8-28A0A0G2JE47 AL590614.2-201ENSMUST00000225374 1937 ntBASIC10.23□□□□□ -0.77
Igkv8-28A0A0G2JE47 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Igkv8-28A0A0G2JE47 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Igkv8-28A0A0G2JE47 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC10.23□□□□□ -0.77
Igkv8-28A0A0G2JE47 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC10.23□□□□□ -0.77
Igkv8-28A0A0G2JE47 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC10.23□□□□□ -0.77
Igkv8-28A0A0G2JE47 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Igkv8-28A0A0G2JE47 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Igkv8-28A0A0G2JE47 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Igkv8-28A0A0G2JE47 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Igkv8-28A0A0G2JE47 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Igkv8-28A0A0G2JE47 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Igkv8-28A0A0G2JE47 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC10.23□□□□□ -0.77
Igkv8-28A0A0G2JE47 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Igkv8-28A0A0G2JE47 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Igkv8-28A0A0G2JE47 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC10.23□□□□□ -0.77
Igkv8-28A0A0G2JE47 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Igkv8-28A0A0G2JE47 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Igkv8-28A0A0G2JE47 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC10.23□□□□□ -0.77
Igkv8-28A0A0G2JE47 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Igkv8-28A0A0G2JE47 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Igkv8-28A0A0G2JE47 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Igkv8-28A0A0G2JE47 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Igkv8-28A0A0G2JE47 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Igkv8-28A0A0G2JE47 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC10.23□□□□□ -0.77
Igkv8-28A0A0G2JE47 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC10.23□□□□□ -0.77
Igkv8-28A0A0G2JE47 Ntrk2-205ENSMUST00000224402 2284 ntBASIC10.23□□□□□ -0.77
Igkv8-28A0A0G2JE47 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Igkv8-28A0A0G2JE47 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Igkv8-28A0A0G2JE47 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Igkv8-28A0A0G2JE47 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Igkv8-28A0A0G2JE47 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Igkv8-28A0A0G2JE47 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Igkv8-28A0A0G2JE47 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Igkv8-28A0A0G2JE47 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Igkv8-28A0A0G2JE47 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Igkv8-28A0A0G2JE47 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC10.22□□□□□ -0.77
Igkv8-28A0A0G2JE47 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Igkv8-28A0A0G2JE47 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Igkv8-28A0A0G2JE47 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Igkv8-28A0A0G2JE47 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Igkv8-28A0A0G2JE47 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Igkv8-28A0A0G2JE47 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Igkv8-28A0A0G2JE47 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Igkv8-28A0A0G2JE47 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Igkv8-28A0A0G2JE47 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Igkv8-28A0A0G2JE47 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Igkv8-28A0A0G2JE47 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Igkv8-28A0A0G2JE47 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Igkv8-28A0A0G2JE47 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Igkv8-28A0A0G2JE47 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC10.22□□□□□ -0.77
Igkv8-28A0A0G2JE47 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Igkv8-28A0A0G2JE47 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Igkv8-28A0A0G2JE47 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Igkv8-28A0A0G2JE47 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Igkv8-28A0A0G2JE47 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Igkv8-28A0A0G2JE47 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC10.22□□□□□ -0.77
Igkv8-28A0A0G2JE47 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Igkv8-28A0A0G2JE47 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Igkv8-28A0A0G2JE47 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Igkv8-28A0A0G2JE47 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Igkv8-28A0A0G2JE47 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
Igkv8-28A0A0G2JE47 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Igkv8-28A0A0G2JE47 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Igkv8-28A0A0G2JE47 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Igkv8-28A0A0G2JE47 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Igkv8-28A0A0G2JE47 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC10.22□□□□□ -0.77
Igkv8-28A0A0G2JE47 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Igkv8-28A0A0G2JE47 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Igkv8-28A0A0G2JE47 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Igkv8-28A0A0G2JE47 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC10.22□□□□□ -0.77
Igkv8-28A0A0G2JE47 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Igkv8-28A0A0G2JE47 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Igkv8-28A0A0G2JE47 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Igkv8-28A0A0G2JE47 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC10.22□□□□□ -0.77
Igkv8-28A0A0G2JE47 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Igkv8-28A0A0G2JE47 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Igkv8-28A0A0G2JE47 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.77
Igkv8-28A0A0G2JE47 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Igkv8-28A0A0G2JE47 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Igkv8-28A0A0G2JE47 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Igkv8-28A0A0G2JE47 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Igkv8-28A0A0G2JE47 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Igkv8-28A0A0G2JE47 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Igkv8-28A0A0G2JE47 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Igkv8-28A0A0G2JE47 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Igkv8-28A0A0G2JE47 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC10.21□□□□□ -0.77
Igkv8-28A0A0G2JE47 Gm10033-202ENSMUST00000211874 928 ntBASIC10.21□□□□□ -0.77
Igkv8-28A0A0G2JE47 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Igkv8-28A0A0G2JE47 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Igkv8-28A0A0G2JE47 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Igkv8-28A0A0G2JE47 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Igkv8-28A0A0G2JE47 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Igkv8-28A0A0G2JE47 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Igkv8-28A0A0G2JE47 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms