Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC12.19□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC12.18□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-1A0A0B4J1P8 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12.18□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.18□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC12.18□□□□□ -0.46
Trbv13-1A0A0B4J1P8 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-1A0A0B4J1P8 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv13-1A0A0B4J1P8 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv13-1A0A0B4J1P8 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.17□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Gm10819-201ENSMUST00000099988 561 ntBASIC12.17□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC12.16□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-1A0A0B4J1P8 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Gm14859-201ENSMUST00000117752 357 ntBASIC12.16□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.16□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC12.16□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.16□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC12.16□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv13-1A0A0B4J1P8 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms