Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trav9-4A0A0B4J1K2 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9-4A0A0B4J1K2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav9-4A0A0B4J1K2 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-4A0A0B4J1K2 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav9-4A0A0B4J1K2 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-4A0A0B4J1K2 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-4A0A0B4J1K2 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav9-4A0A0B4J1K2 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-4A0A0B4J1K2 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Trav9-4A0A0B4J1K2 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-4A0A0B4J1K2 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-4A0A0B4J1K2 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav9-4A0A0B4J1K2 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav9-4A0A0B4J1K2 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-4A0A0B4J1K2 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-4A0A0B4J1K2 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-4A0A0B4J1K2 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-4A0A0B4J1K2 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-4A0A0B4J1K2 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-4A0A0B4J1K2 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-4A0A0B4J1K2 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-4A0A0B4J1K2 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-4A0A0B4J1K2 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav9-4A0A0B4J1K2 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-4A0A0B4J1K2 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
Trav9-4A0A0B4J1K2 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-4A0A0B4J1K2 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav9-4A0A0B4J1K2 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-4A0A0B4J1K2 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-4A0A0B4J1K2 Haglr-201ENSMUST00000100000 2085 ntBASIC12.23□□□□□ -0.45
Trav9-4A0A0B4J1K2 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav9-4A0A0B4J1K2 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-4A0A0B4J1K2 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-4A0A0B4J1K2 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav9-4A0A0B4J1K2 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-4A0A0B4J1K2 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-4A0A0B4J1K2 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-4A0A0B4J1K2 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-4A0A0B4J1K2 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trav9-4A0A0B4J1K2 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-4A0A0B4J1K2 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Trav9-4A0A0B4J1K2 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.23□□□□□ -0.45
Trav9-4A0A0B4J1K2 Gm7977-201ENSMUST00000193787 748 ntBASIC12.23□□□□□ -0.45
Trav9-4A0A0B4J1K2 Gm17808-201ENSMUST00000200859 894 ntBASIC12.23□□□□□ -0.45
Trav9-4A0A0B4J1K2 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-4A0A0B4J1K2 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Trav9-4A0A0B4J1K2 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-4A0A0B4J1K2 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav9-4A0A0B4J1K2 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-4A0A0B4J1K2 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-4A0A0B4J1K2 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-4A0A0B4J1K2 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-4A0A0B4J1K2 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav9-4A0A0B4J1K2 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-4A0A0B4J1K2 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav9-4A0A0B4J1K2 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-4A0A0B4J1K2 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-4A0A0B4J1K2 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-4A0A0B4J1K2 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-4A0A0B4J1K2 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-4A0A0B4J1K2 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-4A0A0B4J1K2 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-4A0A0B4J1K2 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav9-4A0A0B4J1K2 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-4A0A0B4J1K2 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-4A0A0B4J1K2 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-4A0A0B4J1K2 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-4A0A0B4J1K2 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav9-4A0A0B4J1K2 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.22□□□□□ -0.45
Trav9-4A0A0B4J1K2 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-4A0A0B4J1K2 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-4A0A0B4J1K2 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav9-4A0A0B4J1K2 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-4A0A0B4J1K2 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-4A0A0B4J1K2 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-4A0A0B4J1K2 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav9-4A0A0B4J1K2 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Trav9-4A0A0B4J1K2 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-4A0A0B4J1K2 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav9-4A0A0B4J1K2 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-4A0A0B4J1K2 Gm11950-201ENSMUST00000121615 838 ntBASIC12.22□□□□□ -0.45
Trav9-4A0A0B4J1K2 Gm29518-201ENSMUST00000190858 372 ntBASIC12.22□□□□□ -0.45
Trav9-4A0A0B4J1K2 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-4A0A0B4J1K2 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-4A0A0B4J1K2 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav9-4A0A0B4J1K2 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav9-4A0A0B4J1K2 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-4A0A0B4J1K2 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav9-4A0A0B4J1K2 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-4A0A0B4J1K2 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-4A0A0B4J1K2 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-4A0A0B4J1K2 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-4A0A0B4J1K2 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-4A0A0B4J1K2 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-4A0A0B4J1K2 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-4A0A0B4J1K2 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-4A0A0B4J1K2 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav9-4A0A0B4J1K2 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-4A0A0B4J1K2 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms