Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.55■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.55■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.55■□□□□ 0.24
Igkv5-43A0A0B4J1J2 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.55■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Mzt1-203ENSMUST00000227948 952 ntBASIC16.55■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Igkv5-43A0A0B4J1J2 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Gm7862-201ENSMUST00000121461 292 ntBASIC16.54■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.54■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.54■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.54■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Igkv5-43A0A0B4J1J2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Gm6376-201ENSMUST00000209407 580 ntBASIC16.53■□□□□ 0.24
Igkv5-43A0A0B4J1J2 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Igkv5-43A0A0B4J1J2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Igkv5-43A0A0B4J1J2 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.52■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.52■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Gm8097-201ENSMUST00000117903 829 ntBASIC16.52■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.24
Igkv5-43A0A0B4J1J2 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.52■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Igkv5-43A0A0B4J1J2 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.52■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Igkv5-43A0A0B4J1J2 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms