Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.38□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv12-1A0A0B4J1H0 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.38□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Mir3081-201ENSMUST00000175305 84 ntBASIC14.38□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.38□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.37□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.37□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Rprl3-201ENSMUST00000157400 290 ntBASIC14.37□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.37□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.37□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.37□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.37□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Gm14859-201ENSMUST00000117752 357 ntBASIC14.36□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv12-1A0A0B4J1H0 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.35□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.35□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv12-1A0A0B4J1H0 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.34□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.34□□□□□ -0.11
Trbv12-1A0A0B4J1H0 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms