Protein–RNA interactions for Protein: A0A0B4J1F6

BC053393, cDNA sequence BC053393, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC053393A0A0B4J1F6 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
BC053393A0A0B4J1F6 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
BC053393A0A0B4J1F6 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
BC053393A0A0B4J1F6 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BC053393A0A0B4J1F6 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BC053393A0A0B4J1F6 Mir1199-201ENSMUST00000117015 119 ntBASIC13.07□□□□□ -0.32
BC053393A0A0B4J1F6 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
BC053393A0A0B4J1F6 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
BC053393A0A0B4J1F6 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BC053393A0A0B4J1F6 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
BC053393A0A0B4J1F6 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
BC053393A0A0B4J1F6 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BC053393A0A0B4J1F6 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BC053393A0A0B4J1F6 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.07□□□□□ -0.32
BC053393A0A0B4J1F6 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BC053393A0A0B4J1F6 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.07□□□□□ -0.32
BC053393A0A0B4J1F6 Gm7712-202ENSMUST00000222331 1510 ntBASIC13.07□□□□□ -0.32
BC053393A0A0B4J1F6 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
BC053393A0A0B4J1F6 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
BC053393A0A0B4J1F6 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
BC053393A0A0B4J1F6 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
BC053393A0A0B4J1F6 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
BC053393A0A0B4J1F6 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
BC053393A0A0B4J1F6 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
BC053393A0A0B4J1F6 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
BC053393A0A0B4J1F6 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
BC053393A0A0B4J1F6 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
BC053393A0A0B4J1F6 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
BC053393A0A0B4J1F6 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
BC053393A0A0B4J1F6 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
BC053393A0A0B4J1F6 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
BC053393A0A0B4J1F6 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
BC053393A0A0B4J1F6 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
BC053393A0A0B4J1F6 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
BC053393A0A0B4J1F6 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
BC053393A0A0B4J1F6 Gm8520-201ENSMUST00000186517 868 ntBASIC13.06□□□□□ -0.32
BC053393A0A0B4J1F6 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
BC053393A0A0B4J1F6 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
BC053393A0A0B4J1F6 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
BC053393A0A0B4J1F6 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
BC053393A0A0B4J1F6 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
BC053393A0A0B4J1F6 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC13.06□□□□□ -0.32
BC053393A0A0B4J1F6 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
BC053393A0A0B4J1F6 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
BC053393A0A0B4J1F6 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
BC053393A0A0B4J1F6 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
BC053393A0A0B4J1F6 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
BC053393A0A0B4J1F6 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
BC053393A0A0B4J1F6 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
BC053393A0A0B4J1F6 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
BC053393A0A0B4J1F6 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
BC053393A0A0B4J1F6 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
BC053393A0A0B4J1F6 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
BC053393A0A0B4J1F6 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
BC053393A0A0B4J1F6 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
BC053393A0A0B4J1F6 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
BC053393A0A0B4J1F6 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
BC053393A0A0B4J1F6 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
BC053393A0A0B4J1F6 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
BC053393A0A0B4J1F6 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
BC053393A0A0B4J1F6 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
BC053393A0A0B4J1F6 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
BC053393A0A0B4J1F6 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
BC053393A0A0B4J1F6 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
BC053393A0A0B4J1F6 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
BC053393A0A0B4J1F6 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
BC053393A0A0B4J1F6 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
BC053393A0A0B4J1F6 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
BC053393A0A0B4J1F6 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
BC053393A0A0B4J1F6 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
BC053393A0A0B4J1F6 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
BC053393A0A0B4J1F6 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
BC053393A0A0B4J1F6 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
BC053393A0A0B4J1F6 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
BC053393A0A0B4J1F6 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
BC053393A0A0B4J1F6 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
BC053393A0A0B4J1F6 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
BC053393A0A0B4J1F6 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.04□□□□□ -0.32
BC053393A0A0B4J1F6 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
BC053393A0A0B4J1F6 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
BC053393A0A0B4J1F6 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
BC053393A0A0B4J1F6 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
BC053393A0A0B4J1F6 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
BC053393A0A0B4J1F6 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC13.04□□□□□ -0.32
BC053393A0A0B4J1F6 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
BC053393A0A0B4J1F6 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
BC053393A0A0B4J1F6 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
BC053393A0A0B4J1F6 AC153881.1-201ENSMUST00000214448 284 ntBASIC13.04□□□□□ -0.32
BC053393A0A0B4J1F6 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
BC053393A0A0B4J1F6 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
BC053393A0A0B4J1F6 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
BC053393A0A0B4J1F6 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
BC053393A0A0B4J1F6 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.04□□□□□ -0.32
BC053393A0A0B4J1F6 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.04□□□□□ -0.32
BC053393A0A0B4J1F6 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
BC053393A0A0B4J1F6 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
BC053393A0A0B4J1F6 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
BC053393A0A0B4J1F6 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
BC053393A0A0B4J1F6 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
BC053393A0A0B4J1F6 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms