Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv23A0A0A6YWQ1 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv23A0A0A6YWQ1 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv23A0A0A6YWQ1 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv23A0A0A6YWQ1 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv23A0A0A6YWQ1 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv23A0A0A6YWQ1 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.05□□□□□ -0.16
Trbv23A0A0A6YWQ1 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv23A0A0A6YWQ1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Trbv23A0A0A6YWQ1 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.05□□□□□ -0.16
Trbv23A0A0A6YWQ1 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv23A0A0A6YWQ1 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv23A0A0A6YWQ1 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv23A0A0A6YWQ1 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv23A0A0A6YWQ1 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv23A0A0A6YWQ1 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv23A0A0A6YWQ1 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.05□□□□□ -0.16
Trbv23A0A0A6YWQ1 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv23A0A0A6YWQ1 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Trbv23A0A0A6YWQ1 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv23A0A0A6YWQ1 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv23A0A0A6YWQ1 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Trbv23A0A0A6YWQ1 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv23A0A0A6YWQ1 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv23A0A0A6YWQ1 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv23A0A0A6YWQ1 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv23A0A0A6YWQ1 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv23A0A0A6YWQ1 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv23A0A0A6YWQ1 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv23A0A0A6YWQ1 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv23A0A0A6YWQ1 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv23A0A0A6YWQ1 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv23A0A0A6YWQ1 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv23A0A0A6YWQ1 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv23A0A0A6YWQ1 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Trbv23A0A0A6YWQ1 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.04□□□□□ -0.16
Trbv23A0A0A6YWQ1 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv23A0A0A6YWQ1 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.04□□□□□ -0.16
Trbv23A0A0A6YWQ1 Gm10517-202ENSMUST00000192970 758 ntBASIC14.04□□□□□ -0.16
Trbv23A0A0A6YWQ1 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv23A0A0A6YWQ1 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv23A0A0A6YWQ1 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Trbv23A0A0A6YWQ1 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv23A0A0A6YWQ1 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv23A0A0A6YWQ1 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.04□□□□□ -0.16
Trbv23A0A0A6YWQ1 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Trbv23A0A0A6YWQ1 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv23A0A0A6YWQ1 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv23A0A0A6YWQ1 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv23A0A0A6YWQ1 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trbv23A0A0A6YWQ1 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trbv23A0A0A6YWQ1 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv23A0A0A6YWQ1 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv23A0A0A6YWQ1 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv23A0A0A6YWQ1 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv23A0A0A6YWQ1 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv23A0A0A6YWQ1 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv23A0A0A6YWQ1 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.03□□□□□ -0.16
Trbv23A0A0A6YWQ1 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv23A0A0A6YWQ1 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trbv23A0A0A6YWQ1 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv23A0A0A6YWQ1 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv23A0A0A6YWQ1 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv23A0A0A6YWQ1 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trbv23A0A0A6YWQ1 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv23A0A0A6YWQ1 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv23A0A0A6YWQ1 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv23A0A0A6YWQ1 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.03□□□□□ -0.16
Trbv23A0A0A6YWQ1 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Trbv23A0A0A6YWQ1 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.03□□□□□ -0.16
Trbv23A0A0A6YWQ1 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.03□□□□□ -0.16
Trbv23A0A0A6YWQ1 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv23A0A0A6YWQ1 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trbv23A0A0A6YWQ1 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv23A0A0A6YWQ1 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trbv23A0A0A6YWQ1 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv23A0A0A6YWQ1 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.03□□□□□ -0.16
Trbv23A0A0A6YWQ1 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.03□□□□□ -0.16
Trbv23A0A0A6YWQ1 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv23A0A0A6YWQ1 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.03□□□□□ -0.16
Trbv23A0A0A6YWQ1 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv23A0A0A6YWQ1 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv23A0A0A6YWQ1 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv23A0A0A6YWQ1 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv23A0A0A6YWQ1 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Trbv23A0A0A6YWQ1 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv23A0A0A6YWQ1 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv23A0A0A6YWQ1 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv23A0A0A6YWQ1 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv23A0A0A6YWQ1 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv23A0A0A6YWQ1 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv23A0A0A6YWQ1 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv23A0A0A6YWQ1 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv23A0A0A6YWQ1 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv23A0A0A6YWQ1 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.02□□□□□ -0.17
Trbv23A0A0A6YWQ1 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.02□□□□□ -0.17
Trbv23A0A0A6YWQ1 Gm4974-201ENSMUST00000209974 875 ntBASIC14.02□□□□□ -0.17
Trbv23A0A0A6YWQ1 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.02□□□□□ -0.17
Trbv23A0A0A6YWQ1 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv23A0A0A6YWQ1 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms