Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav6d-5A0A075B6B9 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-5A0A075B6B9 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav6d-5A0A075B6B9 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-5A0A075B6B9 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6d-5A0A075B6B9 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-5A0A075B6B9 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-5A0A075B6B9 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-5A0A075B6B9 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-5A0A075B6B9 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-5A0A075B6B9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-5A0A075B6B9 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-5A0A075B6B9 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-5A0A075B6B9 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-5A0A075B6B9 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav6d-5A0A075B6B9 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trav6d-5A0A075B6B9 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-5A0A075B6B9 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-5A0A075B6B9 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-5A0A075B6B9 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.19□□□□□ -0.3
Trav6d-5A0A075B6B9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav6d-5A0A075B6B9 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-5A0A075B6B9 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC13.19□□□□□ -0.3
Trav6d-5A0A075B6B9 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC13.19□□□□□ -0.3
Trav6d-5A0A075B6B9 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-5A0A075B6B9 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-5A0A075B6B9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-5A0A075B6B9 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-5A0A075B6B9 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-5A0A075B6B9 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.19□□□□□ -0.3
Trav6d-5A0A075B6B9 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav6d-5A0A075B6B9 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-5A0A075B6B9 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-5A0A075B6B9 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-5A0A075B6B9 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.19□□□□□ -0.3
Trav6d-5A0A075B6B9 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-5A0A075B6B9 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-5A0A075B6B9 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Trav6d-5A0A075B6B9 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-5A0A075B6B9 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trav6d-5A0A075B6B9 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-5A0A075B6B9 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.18□□□□□ -0.3
Trav6d-5A0A075B6B9 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-5A0A075B6B9 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-5A0A075B6B9 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-5A0A075B6B9 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-5A0A075B6B9 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav6d-5A0A075B6B9 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-5A0A075B6B9 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-5A0A075B6B9 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-5A0A075B6B9 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-5A0A075B6B9 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-5A0A075B6B9 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-5A0A075B6B9 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.18□□□□□ -0.3
Trav6d-5A0A075B6B9 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-5A0A075B6B9 Gm12933-201ENSMUST00000120203 872 ntBASIC13.18□□□□□ -0.3
Trav6d-5A0A075B6B9 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-5A0A075B6B9 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav6d-5A0A075B6B9 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Trav6d-5A0A075B6B9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-5A0A075B6B9 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trav6d-5A0A075B6B9 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Trav6d-5A0A075B6B9 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-5A0A075B6B9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-5A0A075B6B9 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-5A0A075B6B9 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-5A0A075B6B9 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-5A0A075B6B9 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-5A0A075B6B9 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-5A0A075B6B9 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-5A0A075B6B9 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trav6d-5A0A075B6B9 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-5A0A075B6B9 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-5A0A075B6B9 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-5A0A075B6B9 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-5A0A075B6B9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-5A0A075B6B9 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav6d-5A0A075B6B9 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-5A0A075B6B9 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-5A0A075B6B9 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav6d-5A0A075B6B9 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-5A0A075B6B9 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-5A0A075B6B9 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-5A0A075B6B9 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-5A0A075B6B9 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-5A0A075B6B9 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-5A0A075B6B9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-5A0A075B6B9 Gm43183-201ENSMUST00000200632 547 ntBASIC13.17□□□□□ -0.3
Trav6d-5A0A075B6B9 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC13.17□□□□□ -0.3
Trav6d-5A0A075B6B9 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-5A0A075B6B9 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-5A0A075B6B9 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-5A0A075B6B9 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-5A0A075B6B9 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-5A0A075B6B9 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.17□□□□□ -0.3
Trav6d-5A0A075B6B9 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-5A0A075B6B9 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-5A0A075B6B9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav6d-5A0A075B6B9 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav6d-5A0A075B6B9 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms