Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav17A0A075B655 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav17A0A075B655 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav17A0A075B655 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav17A0A075B655 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav17A0A075B655 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav17A0A075B655 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav17A0A075B655 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav17A0A075B655 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav17A0A075B655 Nrn1-203ENSMUST00000223611 1443 ntBASIC12.98□□□□□ -0.33
Trav17A0A075B655 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav17A0A075B655 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav17A0A075B655 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav17A0A075B655 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav17A0A075B655 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav17A0A075B655 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav17A0A075B655 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav17A0A075B655 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav17A0A075B655 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav17A0A075B655 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav17A0A075B655 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC12.98□□□□□ -0.33
Trav17A0A075B655 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav17A0A075B655 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Trav17A0A075B655 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav17A0A075B655 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav17A0A075B655 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav17A0A075B655 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Trav17A0A075B655 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav17A0A075B655 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav17A0A075B655 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav17A0A075B655 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav17A0A075B655 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav17A0A075B655 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav17A0A075B655 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Trav17A0A075B655 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav17A0A075B655 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav17A0A075B655 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav17A0A075B655 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav17A0A075B655 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav17A0A075B655 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav17A0A075B655 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav17A0A075B655 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav17A0A075B655 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav17A0A075B655 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav17A0A075B655 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav17A0A075B655 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav17A0A075B655 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC12.97□□□□□ -0.33
Trav17A0A075B655 AC120002.2-201ENSMUST00000220205 773 ntBASIC12.97□□□□□ -0.33
Trav17A0A075B655 Il3ra-202ENSMUST00000223589 738 ntBASIC12.97□□□□□ -0.33
Trav17A0A075B655 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav17A0A075B655 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav17A0A075B655 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trav17A0A075B655 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav17A0A075B655 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav17A0A075B655 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Trav17A0A075B655 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav17A0A075B655 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Trav17A0A075B655 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.97□□□□□ -0.33
Trav17A0A075B655 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav17A0A075B655 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav17A0A075B655 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav17A0A075B655 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav17A0A075B655 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav17A0A075B655 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trav17A0A075B655 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav17A0A075B655 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav17A0A075B655 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav17A0A075B655 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav17A0A075B655 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trav17A0A075B655 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav17A0A075B655 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav17A0A075B655 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav17A0A075B655 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav17A0A075B655 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav17A0A075B655 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav17A0A075B655 Prob1-201ENSMUST00000097619 3021 ntBASIC12.96□□□□□ -0.33
Trav17A0A075B655 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav17A0A075B655 Gm7638-201ENSMUST00000121348 967 ntBASIC12.96□□□□□ -0.33
Trav17A0A075B655 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav17A0A075B655 Gm5297-201ENSMUST00000198555 1171 ntBASIC12.96□□□□□ -0.33
Trav17A0A075B655 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav17A0A075B655 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav17A0A075B655 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trav17A0A075B655 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Trav17A0A075B655 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav17A0A075B655 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav17A0A075B655 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav17A0A075B655 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Trav17A0A075B655 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
Trav17A0A075B655 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav17A0A075B655 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav17A0A075B655 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav17A0A075B655 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav17A0A075B655 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav17A0A075B655 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav17A0A075B655 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav17A0A075B655 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav17A0A075B655 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav17A0A075B655 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav17A0A075B655 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms