Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.36□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.35□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.35□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.34□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Gm38027-201ENSMUST00000192315 235 ntBASIC13.34□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.34□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav15-2-dv6-2A0A075B650 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.33□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav15-2-dv6-2A0A075B650 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms