Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-3A0A075B648 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-3A0A075B648 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-3A0A075B648 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC11.93□□□□□ -0.5
Trav12-3A0A075B648 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trav12-3A0A075B648 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-3A0A075B648 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-3A0A075B648 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-3A0A075B648 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-3A0A075B648 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-3A0A075B648 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-3A0A075B648 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-3A0A075B648 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-3A0A075B648 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-3A0A075B648 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-3A0A075B648 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-3A0A075B648 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-3A0A075B648 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Trav12-3A0A075B648 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-3A0A075B648 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-3A0A075B648 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-3A0A075B648 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-3A0A075B648 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-3A0A075B648 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav12-3A0A075B648 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav12-3A0A075B648 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC11.93□□□□□ -0.5
Trav12-3A0A075B648 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-3A0A075B648 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav12-3A0A075B648 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav12-3A0A075B648 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav12-3A0A075B648 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-3A0A075B648 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-3A0A075B648 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav12-3A0A075B648 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-3A0A075B648 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-3A0A075B648 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-3A0A075B648 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-3A0A075B648 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Trav12-3A0A075B648 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav12-3A0A075B648 Sorbs3-204ENSMUST00000227929 2460 ntBASIC11.92□□□□□ -0.5
Trav12-3A0A075B648 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-3A0A075B648 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-3A0A075B648 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-3A0A075B648 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-3A0A075B648 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-3A0A075B648 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-3A0A075B648 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC11.92□□□□□ -0.5
Trav12-3A0A075B648 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC11.92□□□□□ -0.5
Trav12-3A0A075B648 Golgb1-201ENSMUST00000023534 498 ntBASIC11.92□□□□□ -0.5
Trav12-3A0A075B648 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-3A0A075B648 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Trav12-3A0A075B648 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav12-3A0A075B648 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-3A0A075B648 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-3A0A075B648 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-3A0A075B648 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav12-3A0A075B648 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-3A0A075B648 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-3A0A075B648 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-3A0A075B648 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-3A0A075B648 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-3A0A075B648 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-3A0A075B648 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12-3A0A075B648 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Trav12-3A0A075B648 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12-3A0A075B648 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12-3A0A075B648 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav12-3A0A075B648 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12-3A0A075B648 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Trav12-3A0A075B648 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12-3A0A075B648 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav12-3A0A075B648 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12-3A0A075B648 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12-3A0A075B648 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12-3A0A075B648 Gm13034-201ENSMUST00000121342 3177 ntBASIC11.91□□□□□ -0.5
Trav12-3A0A075B648 Ptprs-211ENSMUST00000223859 5588 ntBASIC11.91□□□□□ -0.5
Trav12-3A0A075B648 Gm14281-201ENSMUST00000121700 1294 ntBASIC11.91□□□□□ -0.5
Trav12-3A0A075B648 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12-3A0A075B648 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12-3A0A075B648 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12-3A0A075B648 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav12-3A0A075B648 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC11.91□□□□□ -0.5
Trav12-3A0A075B648 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC11.91□□□□□ -0.5
Trav12-3A0A075B648 Gm38285-201ENSMUST00000192928 922 ntBASIC11.91□□□□□ -0.5
Trav12-3A0A075B648 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trav12-3A0A075B648 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12-3A0A075B648 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12-3A0A075B648 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12-3A0A075B648 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12-3A0A075B648 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12-3A0A075B648 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12-3A0A075B648 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12-3A0A075B648 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12-3A0A075B648 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12-3A0A075B648 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Trav12-3A0A075B648 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12-3A0A075B648 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12-3A0A075B648 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.91□□□□□ -0.5
Trav12-3A0A075B648 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12-3A0A075B648 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms