Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13-1A0A075B644 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-1A0A075B644 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-1A0A075B644 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-1A0A075B644 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trav13-1A0A075B644 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-1A0A075B644 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-1A0A075B644 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-1A0A075B644 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-1A0A075B644 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-1A0A075B644 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-1A0A075B644 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Trav13-1A0A075B644 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-1A0A075B644 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-1A0A075B644 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-1A0A075B644 Gm9103-201ENSMUST00000119371 405 ntBASIC11.62□□□□□ -0.55
Trav13-1A0A075B644 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC11.62□□□□□ -0.55
Trav13-1A0A075B644 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-1A0A075B644 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-1A0A075B644 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-1A0A075B644 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
Trav13-1A0A075B644 Ank2-226ENSMUST00000189368 339 ntBASIC11.62□□□□□ -0.55
Trav13-1A0A075B644 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-1A0A075B644 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-1A0A075B644 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-1A0A075B644 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-1A0A075B644 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-1A0A075B644 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trav13-1A0A075B644 Gm6190-201ENSMUST00000220683 1374 ntBASIC11.62□□□□□ -0.55
Trav13-1A0A075B644 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-1A0A075B644 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-1A0A075B644 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav13-1A0A075B644 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trav13-1A0A075B644 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-1A0A075B644 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trav13-1A0A075B644 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-1A0A075B644 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-1A0A075B644 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav13-1A0A075B644 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-1A0A075B644 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trav13-1A0A075B644 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-1A0A075B644 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-1A0A075B644 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-1A0A075B644 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
Trav13-1A0A075B644 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-1A0A075B644 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-1A0A075B644 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-1A0A075B644 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Trav13-1A0A075B644 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-1A0A075B644 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-1A0A075B644 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-1A0A075B644 Gm13186-201ENSMUST00000118031 316 ntBASIC11.61□□□□□ -0.55
Trav13-1A0A075B644 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-1A0A075B644 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav13-1A0A075B644 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-1A0A075B644 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-1A0A075B644 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-1A0A075B644 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav13-1A0A075B644 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-1A0A075B644 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Trav13-1A0A075B644 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-1A0A075B644 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-1A0A075B644 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Trav13-1A0A075B644 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-1A0A075B644 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav13-1A0A075B644 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-1A0A075B644 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-1A0A075B644 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav13-1A0A075B644 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-1A0A075B644 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC11.6□□□□□ -0.55
Trav13-1A0A075B644 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav13-1A0A075B644 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13-1A0A075B644 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13-1A0A075B644 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13-1A0A075B644 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Trav13-1A0A075B644 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13-1A0A075B644 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13-1A0A075B644 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Trav13-1A0A075B644 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13-1A0A075B644 AC154231.1-201ENSMUST00000220564 2175 ntBASIC11.6□□□□□ -0.55
Trav13-1A0A075B644 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trav13-1A0A075B644 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav13-1A0A075B644 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13-1A0A075B644 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC11.6□□□□□ -0.55
Trav13-1A0A075B644 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13-1A0A075B644 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13-1A0A075B644 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Trav13-1A0A075B644 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13-1A0A075B644 Gm17807-201ENSMUST00000186869 298 ntBASIC11.6□□□□□ -0.55
Trav13-1A0A075B644 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13-1A0A075B644 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trav13-1A0A075B644 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13-1A0A075B644 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Trav13-1A0A075B644 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13-1A0A075B644 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
Trav13-1A0A075B644 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13-1A0A075B644 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13-1A0A075B644 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13-1A0A075B644 Phf7-203ENSMUST00000226565 1971 ntBASIC11.59□□□□□ -0.55
Trav13-1A0A075B644 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms