Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4-2A0A075B638 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4-2A0A075B638 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4-2A0A075B638 Gm37292-201ENSMUST00000192062 758 ntBASIC12.94□□□□□ -0.34
Trav4-2A0A075B638 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC12.94□□□□□ -0.34
Trav4-2A0A075B638 Gm9731-201ENSMUST00000209480 747 ntBASIC12.94□□□□□ -0.34
Trav4-2A0A075B638 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4-2A0A075B638 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trav4-2A0A075B638 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4-2A0A075B638 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4-2A0A075B638 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trav4-2A0A075B638 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4-2A0A075B638 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4-2A0A075B638 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4-2A0A075B638 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4-2A0A075B638 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4-2A0A075B638 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Trav4-2A0A075B638 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4-2A0A075B638 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4-2A0A075B638 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trav4-2A0A075B638 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4-2A0A075B638 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4-2A0A075B638 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4-2A0A075B638 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4-2A0A075B638 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Trav4-2A0A075B638 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4-2A0A075B638 Gm13158-201ENSMUST00000122007 736 ntBASIC12.93□□□□□ -0.34
Trav4-2A0A075B638 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4-2A0A075B638 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4-2A0A075B638 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav4-2A0A075B638 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4-2A0A075B638 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4-2A0A075B638 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4-2A0A075B638 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trav4-2A0A075B638 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4-2A0A075B638 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.93□□□□□ -0.34
Trav4-2A0A075B638 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4-2A0A075B638 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4-2A0A075B638 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4-2A0A075B638 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4-2A0A075B638 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4-2A0A075B638 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4-2A0A075B638 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4-2A0A075B638 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav4-2A0A075B638 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav4-2A0A075B638 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav4-2A0A075B638 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4-2A0A075B638 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trav4-2A0A075B638 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4-2A0A075B638 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4-2A0A075B638 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4-2A0A075B638 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4-2A0A075B638 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4-2A0A075B638 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4-2A0A075B638 Mir5133-201ENSMUST00000174955 77 ntBASIC12.92□□□□□ -0.34
Trav4-2A0A075B638 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4-2A0A075B638 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4-2A0A075B638 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
Trav4-2A0A075B638 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4-2A0A075B638 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4-2A0A075B638 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4-2A0A075B638 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4-2A0A075B638 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav4-2A0A075B638 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4-2A0A075B638 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4-2A0A075B638 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4-2A0A075B638 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4-2A0A075B638 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4-2A0A075B638 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4-2A0A075B638 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4-2A0A075B638 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4-2A0A075B638 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav4-2A0A075B638 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC12.91□□□□□ -0.34
Trav4-2A0A075B638 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4-2A0A075B638 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4-2A0A075B638 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4-2A0A075B638 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav4-2A0A075B638 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC12.91□□□□□ -0.34
Trav4-2A0A075B638 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4-2A0A075B638 Gm44672-201ENSMUST00000206944 1098 ntBASIC12.91□□□□□ -0.34
Trav4-2A0A075B638 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC12.91□□□□□ -0.34
Trav4-2A0A075B638 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4-2A0A075B638 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Trav4-2A0A075B638 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav4-2A0A075B638 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav4-2A0A075B638 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav4-2A0A075B638 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4-2A0A075B638 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4-2A0A075B638 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4-2A0A075B638 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4-2A0A075B638 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav4-2A0A075B638 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav4-2A0A075B638 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav4-2A0A075B638 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.9□□□□□ -0.34
Trav4-2A0A075B638 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4-2A0A075B638 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4-2A0A075B638 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4-2A0A075B638 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Trav4-2A0A075B638 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav4-2A0A075B638 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms