Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16nA0A075B634 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16nA0A075B634 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16nA0A075B634 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC12.37□□□□□ -0.43
Trav16nA0A075B634 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16nA0A075B634 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.37□□□□□ -0.43
Trav16nA0A075B634 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16nA0A075B634 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16nA0A075B634 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16nA0A075B634 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16nA0A075B634 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16nA0A075B634 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16nA0A075B634 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Trav16nA0A075B634 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav16nA0A075B634 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16nA0A075B634 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16nA0A075B634 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16nA0A075B634 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16nA0A075B634 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav16nA0A075B634 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16nA0A075B634 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16nA0A075B634 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16nA0A075B634 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16nA0A075B634 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16nA0A075B634 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16nA0A075B634 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16nA0A075B634 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16nA0A075B634 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16nA0A075B634 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16nA0A075B634 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16nA0A075B634 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16nA0A075B634 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16nA0A075B634 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Trav16nA0A075B634 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16nA0A075B634 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16nA0A075B634 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16nA0A075B634 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav16nA0A075B634 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16nA0A075B634 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16nA0A075B634 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16nA0A075B634 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16nA0A075B634 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16nA0A075B634 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16nA0A075B634 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16nA0A075B634 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16nA0A075B634 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16nA0A075B634 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16nA0A075B634 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16nA0A075B634 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16nA0A075B634 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16nA0A075B634 Gm27000-201ENSMUST00000182943 842 ntBASIC12.36□□□□□ -0.43
Trav16nA0A075B634 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16nA0A075B634 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16nA0A075B634 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav16nA0A075B634 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16nA0A075B634 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16nA0A075B634 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16nA0A075B634 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav16nA0A075B634 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Trav16nA0A075B634 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav16nA0A075B634 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16nA0A075B634 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16nA0A075B634 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16nA0A075B634 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16nA0A075B634 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav16nA0A075B634 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16nA0A075B634 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.35□□□□□ -0.43
Trav16nA0A075B634 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trav16nA0A075B634 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16nA0A075B634 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16nA0A075B634 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16nA0A075B634 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16nA0A075B634 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16nA0A075B634 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16nA0A075B634 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav16nA0A075B634 Gm37292-201ENSMUST00000192062 758 ntBASIC12.35□□□□□ -0.43
Trav16nA0A075B634 Gm3807-201ENSMUST00000193520 1168 ntBASIC12.35□□□□□ -0.43
Trav16nA0A075B634 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16nA0A075B634 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16nA0A075B634 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16nA0A075B634 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16nA0A075B634 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Trav16nA0A075B634 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav16nA0A075B634 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16nA0A075B634 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16nA0A075B634 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16nA0A075B634 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16nA0A075B634 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16nA0A075B634 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav16nA0A075B634 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16nA0A075B634 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16nA0A075B634 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16nA0A075B634 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav16nA0A075B634 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16nA0A075B634 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC12.34□□□□□ -0.43
Trav16nA0A075B634 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16nA0A075B634 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16nA0A075B634 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16nA0A075B634 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav16nA0A075B634 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms