Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Trav9n-4A0A075B631 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav9n-4A0A075B631 Arhgef33-211ENSMUST00000225658 473 ntBASIC11.16□□□□□ -0.62
Trav9n-4A0A075B631 Odf3b-204ENSMUST00000227834 930 ntBASIC11.16□□□□□ -0.62
Trav9n-4A0A075B631 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav9n-4A0A075B631 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav9n-4A0A075B631 Gm10812-201ENSMUST00000099864 546 ntBASIC11.16□□□□□ -0.62
Trav9n-4A0A075B631 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav9n-4A0A075B631 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Trav9n-4A0A075B631 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav9n-4A0A075B631 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav9n-4A0A075B631 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Trav9n-4A0A075B631 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav9n-4A0A075B631 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC11.16□□□□□ -0.62
Trav9n-4A0A075B631 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav9n-4A0A075B631 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav9n-4A0A075B631 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav9n-4A0A075B631 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav9n-4A0A075B631 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav9n-4A0A075B631 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav9n-4A0A075B631 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav9n-4A0A075B631 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav9n-4A0A075B631 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav9n-4A0A075B631 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav9n-4A0A075B631 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Trav9n-4A0A075B631 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav9n-4A0A075B631 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav9n-4A0A075B631 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC11.15□□□□□ -0.62
Trav9n-4A0A075B631 Gm27463-201ENSMUST00000183569 57 ntBASIC11.15□□□□□ -0.62
Trav9n-4A0A075B631 Gm3375-201ENSMUST00000203929 796 ntBASIC11.15□□□□□ -0.62
Trav9n-4A0A075B631 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav9n-4A0A075B631 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Trav9n-4A0A075B631 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav9n-4A0A075B631 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav9n-4A0A075B631 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Trav9n-4A0A075B631 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav9n-4A0A075B631 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav9n-4A0A075B631 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav9n-4A0A075B631 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav9n-4A0A075B631 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav9n-4A0A075B631 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav9n-4A0A075B631 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.63
Trav9n-4A0A075B631 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC11.15□□□□□ -0.63
Trav9n-4A0A075B631 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC11.15□□□□□ -0.63
Trav9n-4A0A075B631 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav9n-4A0A075B631 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-4A0A075B631 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-4A0A075B631 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-4A0A075B631 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-4A0A075B631 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav9n-4A0A075B631 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC11.14□□□□□ -0.63
Trav9n-4A0A075B631 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-4A0A075B631 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-4A0A075B631 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-4A0A075B631 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-4A0A075B631 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-4A0A075B631 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Trav9n-4A0A075B631 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-4A0A075B631 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-4A0A075B631 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-4A0A075B631 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC11.14□□□□□ -0.63
Trav9n-4A0A075B631 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav9n-4A0A075B631 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-4A0A075B631 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-4A0A075B631 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-4A0A075B631 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-4A0A075B631 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-4A0A075B631 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Trav9n-4A0A075B631 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-4A0A075B631 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-4A0A075B631 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-4A0A075B631 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-4A0A075B631 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-4A0A075B631 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-4A0A075B631 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-4A0A075B631 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-4A0A075B631 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Trav9n-4A0A075B631 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav9n-4A0A075B631 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-4A0A075B631 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-4A0A075B631 Gm5421-201ENSMUST00000181698 2354 ntBASIC11.13□□□□□ -0.63
Trav9n-4A0A075B631 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-4A0A075B631 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-4A0A075B631 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-4A0A075B631 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Trav9n-4A0A075B631 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-4A0A075B631 AC154855.1-201ENSMUST00000227353 1458 ntBASIC11.13□□□□□ -0.63
Trav9n-4A0A075B631 Gfra2-202ENSMUST00000227633 1480 ntBASIC11.13□□□□□ -0.63
Trav9n-4A0A075B631 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-4A0A075B631 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trav9n-4A0A075B631 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC11.13□□□□□ -0.63
Trav9n-4A0A075B631 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-4A0A075B631 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-4A0A075B631 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC11.13□□□□□ -0.63
Trav9n-4A0A075B631 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-4A0A075B631 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-4A0A075B631 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav9n-4A0A075B631 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC11.13□□□□□ -0.63
Trav9n-4A0A075B631 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC11.13□□□□□ -0.63
Trav9n-4A0A075B631 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms