Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6n-5A0A075B621 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6n-5A0A075B621 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6n-5A0A075B621 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.67□□□□□ -0.38
Trav6n-5A0A075B621 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6n-5A0A075B621 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6n-5A0A075B621 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6n-5A0A075B621 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Trav6n-5A0A075B621 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Trav6n-5A0A075B621 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6n-5A0A075B621 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6n-5A0A075B621 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6n-5A0A075B621 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav6n-5A0A075B621 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav6n-5A0A075B621 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav6n-5A0A075B621 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6n-5A0A075B621 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Trav6n-5A0A075B621 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6n-5A0A075B621 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6n-5A0A075B621 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6n-5A0A075B621 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC12.66□□□□□ -0.38
Trav6n-5A0A075B621 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6n-5A0A075B621 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6n-5A0A075B621 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav6n-5A0A075B621 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6n-5A0A075B621 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6n-5A0A075B621 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6n-5A0A075B621 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.66□□□□□ -0.38
Trav6n-5A0A075B621 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav6n-5A0A075B621 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6n-5A0A075B621 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6n-5A0A075B621 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC12.66□□□□□ -0.38
Trav6n-5A0A075B621 Gm10033-202ENSMUST00000211874 928 ntBASIC12.66□□□□□ -0.38
Trav6n-5A0A075B621 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC12.66□□□□□ -0.38
Trav6n-5A0A075B621 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6n-5A0A075B621 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6n-5A0A075B621 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6n-5A0A075B621 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6n-5A0A075B621 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6n-5A0A075B621 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6n-5A0A075B621 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6n-5A0A075B621 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6n-5A0A075B621 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6n-5A0A075B621 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav6n-5A0A075B621 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6n-5A0A075B621 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6n-5A0A075B621 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6n-5A0A075B621 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6n-5A0A075B621 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6n-5A0A075B621 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6n-5A0A075B621 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6n-5A0A075B621 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6n-5A0A075B621 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6n-5A0A075B621 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6n-5A0A075B621 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC12.65□□□□□ -0.38
Trav6n-5A0A075B621 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6n-5A0A075B621 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6n-5A0A075B621 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC12.65□□□□□ -0.38
Trav6n-5A0A075B621 Gm18671-201ENSMUST00000214826 683 ntBASIC12.65□□□□□ -0.38
Trav6n-5A0A075B621 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trav6n-5A0A075B621 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6n-5A0A075B621 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6n-5A0A075B621 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6n-5A0A075B621 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6n-5A0A075B621 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6n-5A0A075B621 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6n-5A0A075B621 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Trav6n-5A0A075B621 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6n-5A0A075B621 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav6n-5A0A075B621 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6n-5A0A075B621 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6n-5A0A075B621 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6n-5A0A075B621 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trav6n-5A0A075B621 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Trav6n-5A0A075B621 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav6n-5A0A075B621 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6n-5A0A075B621 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6n-5A0A075B621 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6n-5A0A075B621 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC12.64□□□□□ -0.39
Trav6n-5A0A075B621 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6n-5A0A075B621 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC12.64□□□□□ -0.39
Trav6n-5A0A075B621 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6n-5A0A075B621 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC12.64□□□□□ -0.39
Trav6n-5A0A075B621 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6n-5A0A075B621 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC12.64□□□□□ -0.39
Trav6n-5A0A075B621 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6n-5A0A075B621 Rab3c-203ENSMUST00000224180 967 ntBASIC12.64□□□□□ -0.39
Trav6n-5A0A075B621 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav6n-5A0A075B621 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6n-5A0A075B621 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC12.64□□□□□ -0.39
Trav6n-5A0A075B621 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6n-5A0A075B621 Gm45203-201ENSMUST00000206384 1831 ntBASIC12.64□□□□□ -0.39
Trav6n-5A0A075B621 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trav6n-5A0A075B621 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6n-5A0A075B621 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6n-5A0A075B621 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6n-5A0A075B621 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6n-5A0A075B621 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6n-5A0A075B621 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6n-5A0A075B621 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms