Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16d-dv11A0A075B617 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16d-dv11A0A075B617 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Trav16d-dv11A0A075B617 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC12.03□□□□□ -0.48
Trav16d-dv11A0A075B617 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16d-dv11A0A075B617 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16d-dv11A0A075B617 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav16d-dv11A0A075B617 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16d-dv11A0A075B617 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16d-dv11A0A075B617 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav16d-dv11A0A075B617 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16d-dv11A0A075B617 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Trav16d-dv11A0A075B617 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Trav16d-dv11A0A075B617 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC12.03□□□□□ -0.48
Trav16d-dv11A0A075B617 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16d-dv11A0A075B617 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav16d-dv11A0A075B617 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16d-dv11A0A075B617 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16d-dv11A0A075B617 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Trav16d-dv11A0A075B617 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16d-dv11A0A075B617 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav16d-dv11A0A075B617 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav16d-dv11A0A075B617 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav16d-dv11A0A075B617 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav16d-dv11A0A075B617 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav16d-dv11A0A075B617 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav16d-dv11A0A075B617 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav16d-dv11A0A075B617 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav16d-dv11A0A075B617 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav16d-dv11A0A075B617 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16d-dv11A0A075B617 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16d-dv11A0A075B617 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16d-dv11A0A075B617 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16d-dv11A0A075B617 Sybu-209ENSMUST00000228639 4113 ntBASIC12.02□□□□□ -0.49
Trav16d-dv11A0A075B617 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16d-dv11A0A075B617 CT010444.2-201ENSMUST00000217877 1629 ntBASIC12.02□□□□□ -0.49
Trav16d-dv11A0A075B617 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16d-dv11A0A075B617 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16d-dv11A0A075B617 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Trav16d-dv11A0A075B617 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC12.02□□□□□ -0.49
Trav16d-dv11A0A075B617 Gm11927-201ENSMUST00000118472 759 ntBASIC12.02□□□□□ -0.49
Trav16d-dv11A0A075B617 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16d-dv11A0A075B617 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Trav16d-dv11A0A075B617 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16d-dv11A0A075B617 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16d-dv11A0A075B617 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav16d-dv11A0A075B617 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trav16d-dv11A0A075B617 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16d-dv11A0A075B617 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16d-dv11A0A075B617 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16d-dv11A0A075B617 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16d-dv11A0A075B617 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16d-dv11A0A075B617 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16d-dv11A0A075B617 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16d-dv11A0A075B617 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16d-dv11A0A075B617 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trav16d-dv11A0A075B617 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trav16d-dv11A0A075B617 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16d-dv11A0A075B617 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav16d-dv11A0A075B617 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16d-dv11A0A075B617 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16d-dv11A0A075B617 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16d-dv11A0A075B617 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav16d-dv11A0A075B617 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16d-dv11A0A075B617 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav16d-dv11A0A075B617 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16d-dv11A0A075B617 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav16d-dv11A0A075B617 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16d-dv11A0A075B617 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16d-dv11A0A075B617 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16d-dv11A0A075B617 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16d-dv11A0A075B617 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16d-dv11A0A075B617 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC12.01□□□□□ -0.49
Trav16d-dv11A0A075B617 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16d-dv11A0A075B617 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC12.01□□□□□ -0.49
Trav16d-dv11A0A075B617 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Trav16d-dv11A0A075B617 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16d-dv11A0A075B617 Gm6365-201ENSMUST00000054711 744 ntBASIC12.01□□□□□ -0.49
Trav16d-dv11A0A075B617 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16d-dv11A0A075B617 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav16d-dv11A0A075B617 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16d-dv11A0A075B617 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16d-dv11A0A075B617 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16d-dv11A0A075B617 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16d-dv11A0A075B617 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16d-dv11A0A075B617 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16d-dv11A0A075B617 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16d-dv11A0A075B617 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16d-dv11A0A075B617 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Trav16d-dv11A0A075B617 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16d-dv11A0A075B617 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16d-dv11A0A075B617 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16d-dv11A0A075B617 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16d-dv11A0A075B617 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16d-dv11A0A075B617 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16d-dv11A0A075B617 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.01□□□□□ -0.49
Trav16d-dv11A0A075B617 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16d-dv11A0A075B617 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16d-dv11A0A075B617 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16d-dv11A0A075B617 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms