Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9-1A0A075B601 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9-1A0A075B601 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9-1A0A075B601 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9-1A0A075B601 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9-1A0A075B601 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9-1A0A075B601 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav9-1A0A075B601 Actl10-202ENSMUST00000226583 1501 ntBASIC12.74□□□□□ -0.37
Trav9-1A0A075B601 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9-1A0A075B601 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9-1A0A075B601 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Trav9-1A0A075B601 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
Trav9-1A0A075B601 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9-1A0A075B601 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9-1A0A075B601 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC12.74□□□□□ -0.37
Trav9-1A0A075B601 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9-1A0A075B601 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9-1A0A075B601 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav9-1A0A075B601 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9-1A0A075B601 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9-1A0A075B601 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9-1A0A075B601 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9-1A0A075B601 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav9-1A0A075B601 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav9-1A0A075B601 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9-1A0A075B601 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9-1A0A075B601 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav9-1A0A075B601 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-1A0A075B601 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav9-1A0A075B601 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-1A0A075B601 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-1A0A075B601 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-1A0A075B601 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav9-1A0A075B601 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.73□□□□□ -0.37
Trav9-1A0A075B601 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-1A0A075B601 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-1A0A075B601 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav9-1A0A075B601 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Trav9-1A0A075B601 Gm13186-201ENSMUST00000118031 316 ntBASIC12.73□□□□□ -0.37
Trav9-1A0A075B601 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC12.73□□□□□ -0.37
Trav9-1A0A075B601 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-1A0A075B601 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-1A0A075B601 Gm7370-201ENSMUST00000219471 767 ntBASIC12.73□□□□□ -0.37
Trav9-1A0A075B601 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Trav9-1A0A075B601 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-1A0A075B601 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav9-1A0A075B601 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-1A0A075B601 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-1A0A075B601 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-1A0A075B601 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.73□□□□□ -0.37
Trav9-1A0A075B601 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav9-1A0A075B601 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-1A0A075B601 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-1A0A075B601 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-1A0A075B601 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-1A0A075B601 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-1A0A075B601 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-1A0A075B601 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-1A0A075B601 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Trav9-1A0A075B601 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-1A0A075B601 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9-1A0A075B601 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9-1A0A075B601 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav9-1A0A075B601 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9-1A0A075B601 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9-1A0A075B601 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9-1A0A075B601 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9-1A0A075B601 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9-1A0A075B601 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav9-1A0A075B601 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9-1A0A075B601 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9-1A0A075B601 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9-1A0A075B601 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav9-1A0A075B601 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC12.72□□□□□ -0.37
Trav9-1A0A075B601 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9-1A0A075B601 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav9-1A0A075B601 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC12.72□□□□□ -0.37
Trav9-1A0A075B601 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC12.72□□□□□ -0.37
Trav9-1A0A075B601 Gm30025-201ENSMUST00000218555 728 ntBASIC12.72□□□□□ -0.37
Trav9-1A0A075B601 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trav9-1A0A075B601 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9-1A0A075B601 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9-1A0A075B601 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9-1A0A075B601 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav9-1A0A075B601 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9-1A0A075B601 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav9-1A0A075B601 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Trav9-1A0A075B601 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Trav9-1A0A075B601 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav9-1A0A075B601 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9-1A0A075B601 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9-1A0A075B601 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.72□□□□□ -0.37
Trav9-1A0A075B601 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9-1A0A075B601 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Trav9-1A0A075B601 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9-1A0A075B601 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9-1A0A075B601 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9-1A0A075B601 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9-1A0A075B601 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9-1A0A075B601 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms