Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gm31748-201ENSMUST00000194938 1497 ntBASIC24.43■■□□□ 1.5
Smarcb1Q9Z0H3 Amer2-203ENSMUST00000225247 2662 ntBASIC24.42■■□□□ 1.5
Smarcb1Q9Z0H3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Smarcb1Q9Z0H3 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Smarcb1Q9Z0H3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC24.41■■□□□ 1.5
Smarcb1Q9Z0H3 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
Smarcb1Q9Z0H3 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Smarcb1Q9Z0H3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Smarcb1Q9Z0H3 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Smarcb1Q9Z0H3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
Smarcb1Q9Z0H3 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC24.39■■□□□ 1.5
Smarcb1Q9Z0H3 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Smarcb1Q9Z0H3 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Smarcb1Q9Z0H3 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
Smarcb1Q9Z0H3 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Smarcb1Q9Z0H3 Gm9806-201ENSMUST00000051080 552 ntBASIC24.38■■□□□ 1.49
Smarcb1Q9Z0H3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Smarcb1Q9Z0H3 Scarna2-201ENSMUST00000157560 414 ntBASIC24.37■■□□□ 1.49
Smarcb1Q9Z0H3 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Smarcb1Q9Z0H3 Gm14121-201ENSMUST00000121441 1380 ntBASIC24.37■■□□□ 1.49
Smarcb1Q9Z0H3 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Smarcb1Q9Z0H3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Smarcb1Q9Z0H3 Gm9812-201ENSMUST00000061934 968 ntBASIC24.36■■□□□ 1.49
Smarcb1Q9Z0H3 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Smarcb1Q9Z0H3 Gm11687-201ENSMUST00000118911 886 ntBASIC24.35■■□□□ 1.49
Smarcb1Q9Z0H3 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Smarcb1Q9Z0H3 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Smarcb1Q9Z0H3 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Smarcb1Q9Z0H3 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
Smarcb1Q9Z0H3 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Smarcb1Q9Z0H3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Smarcb1Q9Z0H3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Smarcb1Q9Z0H3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Smarcb1Q9Z0H3 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC24.31■■□□□ 1.48
Smarcb1Q9Z0H3 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Smarcb1Q9Z0H3 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Smarcb1Q9Z0H3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Smarcb1Q9Z0H3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC24.3■■□□□ 1.48
Smarcb1Q9Z0H3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Smarcb1Q9Z0H3 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Smarcb1Q9Z0H3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
Smarcb1Q9Z0H3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC24.28■■□□□ 1.48
Smarcb1Q9Z0H3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Smarcb1Q9Z0H3 Gm16437-201ENSMUST00000025669 507 ntBASIC24.27■■□□□ 1.48
Smarcb1Q9Z0H3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24.25■■□□□ 1.47
Smarcb1Q9Z0H3 Cap2-205ENSMUST00000225824 1634 ntBASIC24.25■■□□□ 1.47
Smarcb1Q9Z0H3 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Smarcb1Q9Z0H3 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Smarcb1Q9Z0H3 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.25■■□□□ 1.47
Smarcb1Q9Z0H3 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Smarcb1Q9Z0H3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Smarcb1Q9Z0H3 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC24.24■■□□□ 1.47
Smarcb1Q9Z0H3 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC24.24■■□□□ 1.47
Smarcb1Q9Z0H3 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Smarcb1Q9Z0H3 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.23■■□□□ 1.47
Smarcb1Q9Z0H3 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC24.23■■□□□ 1.47
Smarcb1Q9Z0H3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC24.23■■□□□ 1.47
Smarcb1Q9Z0H3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Smarcb1Q9Z0H3 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Smarcb1Q9Z0H3 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Smarcb1Q9Z0H3 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
Smarcb1Q9Z0H3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Smarcb1Q9Z0H3 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC24.21■■□□□ 1.47
Smarcb1Q9Z0H3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC24.21■■□□□ 1.47
Smarcb1Q9Z0H3 AC153911.1-201ENSMUST00000220378 758 ntBASIC24.21■■□□□ 1.47
Smarcb1Q9Z0H3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Smarcb1Q9Z0H3 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
Smarcb1Q9Z0H3 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
Smarcb1Q9Z0H3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
Smarcb1Q9Z0H3 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC24.2■■□□□ 1.46
Smarcb1Q9Z0H3 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Smarcb1Q9Z0H3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Smarcb1Q9Z0H3 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Smarcb1Q9Z0H3 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Smarcb1Q9Z0H3 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Smarcb1Q9Z0H3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Smarcb1Q9Z0H3 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Smarcb1Q9Z0H3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Smarcb1Q9Z0H3 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Smarcb1Q9Z0H3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC24.16■■□□□ 1.46
Smarcb1Q9Z0H3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Smarcb1Q9Z0H3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Smarcb1Q9Z0H3 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Smarcb1Q9Z0H3 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Smarcb1Q9Z0H3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Smarcb1Q9Z0H3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Smarcb1Q9Z0H3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Smarcb1Q9Z0H3 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.13■■□□□ 1.45
Smarcb1Q9Z0H3 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Smarcb1Q9Z0H3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Smarcb1Q9Z0H3 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC24.13■■□□□ 1.45
Smarcb1Q9Z0H3 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Smarcb1Q9Z0H3 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Smarcb1Q9Z0H3 Gm9910-201ENSMUST00000195385 1550 ntBASIC24.12■■□□□ 1.45
Smarcb1Q9Z0H3 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Smarcb1Q9Z0H3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Smarcb1Q9Z0H3 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC24.12■■□□□ 1.45
Smarcb1Q9Z0H3 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Smarcb1Q9Z0H3 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC24.12■■□□□ 1.45
Smarcb1Q9Z0H3 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms